Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03025 ATGGAGAATGAGGCACATAGCATGTCATCTGATATAGGAATAGGTGTGAATGAGAAGATGGTTGAGGCACTTGAGTCAAGTGACAACATCCCACTGTTGCTCACCAATTCTGGCTCTCTCAAAAGGACAGGGACGGTGTGGACAGCAGTGGCACACATAGTGACTGGGGTGATAGGATCCGGAGTGCTGTCTCTGCCGTGGAGCACTGCACAGCTTGGTTGGCTTGCAGGACCACTCTCAGTCATTCTCATTGCTTCCATCACTCTGTTCTCTTCTTTTCTTCTATGCAACACTTATCGCCATCCCCATCCTGAACATGGCCCAAATAGGAGTGCTTCCTACCTTGATGTTGTCCATCTGCATTTAGGAATAAGTAATGGGCGGCTCAGTGGTCTTCTTGTGAATATAAGTTTGTATGGTTTTGCAATCGCCTTCGTCATTACAACAGCTATCAGCTTAAGAACAATACAACATTCATTTTGTTACCACAACGAAGGGAGTGAAGCATCATGTGAATTTGCAGATGCATATTACATGCTGCTTTTTGGCGTTATCCAAATTATTCTCTCACAGATACCCAACTTCCATAACATTGAATGGTTGTCGGTTGTTGCTGCAATTATGTCCTTTACTTATTCTTTCATAGGAATGGGGCTTTCCATTGCACAAATCATAGACAAAGGACATGCTGAGGGTAGCATTGGAGGAATCAGTACCTCCAGTGGAACTGAAAAGTTATGGCTGGTTTCTCAAGCACTTGGTGACATATCATTCTCATTTCCGTTCTCAACAATTATTATGGAAATACAGGATACTTTGAAATCACCTCCACCTGAAAACCAAACCATGAAGAAGGCCTCAGTAATTGCGGTCACTGTCACAACATTTATGTACCTCAGTTGTGGAGGTGCTGGATATGCTGCCTTTGGTGATAATACACCAGGAAACCTTTTAACAGGGTTTGAATCCTCTAAGTCGTCTTACTGGCTTGTGAACTTTGCTAACGTTTGTATAGTGGTTCACCTAGTTGGTTCATATCAGGTGTATAGCCAGCCACTTTTTGCCACTGTTGAGAGTTGGTTCCGTTTTAATTTCCCGGATAGTGAATTTATGAATCACACATATATCTTGAAACTCCCGTTGCTACCAGCCTTTGAACTTAATTTTCTCAGCCTGACTTTCAGAACTGCTTATGTTGCATCCACAGTTGTGATTGCAATGGTCTTTCCCTACTTCAACCAGATTTTGGGGGTTCTGGGTAGCATGATTTTTTGGCCATTGACCATATATTTTCCTGTGGAAATATATTTGAATCAATCCTCTACTGTACCATGGACGACTAAGTGGGTCCTGCTTCGAACTTTCAGCATTGTTGGCTTTGTTTTTGGATTGTTCACTCTCACTGGATGTATTAAAGGAATAGTAGCTCAAAAAATTGGCTGA 1443 0.4234 MENEAHSMSSDIGIGVNEKMVEALESSDNIPLLLTNSGSLKRTGTVWTAVAHIVTGVIGSGVLSLPWSTAQLGWLAGPLSVILIASITLFSSFLLCNTYRHPHPEHGPNRSASYLDVVHLHLGISNGRLSGLLVNISLYGFAIAFVITTAISLRTIQHSFCYHNEGSEASCEFADAYYMLLFGVIQIILSQIPNFHNIEWLSVVAAIMSFTYSFIGMGLSIAQIIDKGHAEGSIGGISTSSGTEKLWLVSQALGDISFSFPFSTIIMEIQDTLKSPPPENQTMKKASVIAVTVTTFMYLSCGGAGYAAFGDNTPGNLLTGFESSKSSYWLVNFANVCIVVHLVGSYQVYSQPLFATVESWFRFNFPDSEFMNHTYILKLPLLPAFELNFLSLTFRTAYVASTVVIAMVFPYFNQILGVLGSMIFWPLTIYFPVEIYLNQSSTVPWTTKWVLLRTFSIVGFVFGLFTLTGCIKGIVAQKIG 480
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03025 480 PANTHER OS05G0424000 PROTEIN-RELATED 45 462 - -
Viun8g03025 480 Pfam Transmembrane amino acid transporter protein 42 473 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03025 Viun-Chr8 37470607 37474131 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03025 34 457 Organic Solute Cotransporters AT1G77380 49.296 6.84e-150 434
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03025 K24917 - gmx:100788056 833.558
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g03025 8 37470607 37474131 Viun8g03025 8 37470607 37474131 ECH