Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03020 ATGACTGTGGGGGCAGGGATATCTGTTGCAGATGGAAACTTGATGGTGTTGGGGAAGAAAGTGCTGAGCCATGTCCATGACAACGTTGTTGTTAACCCTGCATGTGGGGGTGCGTTGCTCAATGGGGCATTCATTGGGGTTGAATCCCATCAAAAGGGTAGTCGCACAGTCTTCCCAATCGGCAAGCTTGAGGGGTTGCGGTTTATGTGTGTTTTCCGGTTCAAGATGTGGTGGATGACGCAGAGAATGGGTACCTGTGGAAAAGAAGTCCCCTTTGAGACGCAGTTCTTGCTTGTTGAAGCACAAAGTGGCTCTGATATTGATGCAGGAGAAGGCCAAACTGCTGCTACCTATGCAGTTTTCCTACCCCTTCTGGAAGGAGATTTCAGAGCAGTTCTTCAGGGGAATGATCAAAACGAGATTGAGATCTGTGTGGAAAGTGGTTGTCCTGCTGTGGAGGACTTCGATGGGACTCATTTGGTTTATATCGGGGCTGGATCCGACCCTTACGAAGTCATAACAAATTCTGTCAAAGCTGTAGAGAAACACTTACATACCTTTGCTCATCGCGAGCGAAAGAAGATGCCAGATATCTTGAACTGGTTTGGATGGTGTACATGGGATGCTTTCTACACTAATGTCACTTCAGAGAATGTGAAGCAAGGATTACAGAGCTTCGAGAAAGGTGGAATTCCTGCTAAGTTTGTTATAATTGATGATGGCTGGCAATCTGTTGACATGGACCCTAATGGTACTGAATGGAAATCTGATCATGCAGCCAATTTCGCAAATCGCTTAACCAACATCAAAGAGAATCACAAATTCCAGAAAGATGGCAAAGAAGGTGAAAGAGTAGAGGATCCAGCTCTGGGACTTCGTCATATTACCAATGAAATCAAACAAGAGCATGATATAAAGTACGTATATGTGTGGCACGCAATAACAGGATACTGGGGTGGTGTTAAACCCGGGGTTACCGGCATGGAGCACTATGACTCAAAGATGGCCTTCCCTGTCTCATCTCCTGGAGTTGAGTCAAATCAACCAGATGAAGCTTTGGCAACCATTGCCATCAATGGGCTTGGTCTTGTGAATCCCGAGAAAGTTTTTCACTTCTATGATGAACTTCACTCATATTTGGCATCTGCTGGTATTGATGGTGTCAAGGTTGATGTTCAGAATATCCTTGAAACTCTTGGAGCAGGACATGGTGGGAGGGTGAAACTTGCAAGAAAATACCACCAGGCGTTAGAGGCATCAATTTCCAGGAACTTCCCTGATAATGGAATTATTTGTTGCATGAGTCACAACACTGATGGACTATACAGTGCAAAGCGTTCAGCTGTTATTAGGGCATCAGATGATTTCTGGCCAAGAGACCCTGCTTCCCACACTATTCACATTGCATCAGTGGCTTATAATACTATTTTCCTTGGTGAATTTATGCAGCCAGACTGGGATATGTTTCATAGTCTGCATCCAATGGCTGAATACCACGCAGCAGCACGATCTGTAGGAGGATGTCCAATATATGTCAGTGACAAGCCAGGACACCATGACTTTGATCTTTTGAAGAAACTTGTACTACCTGATGGTTCTATACTAAGAGCTAAACTTCCAGGAAGACCAACAAAGGATTGTTTATTTACTGATCCAGCCAGAGATGGAAAGAGTCTTCTAAAGATTTGGAACATGAATGATTTTTCTGGAGTTGTTGCGGTATTCAATTGTCAAGGAGCTGGGTGGTGCAAAGTTGATAAGAAGAACCTTATCCATGATGACAATCCAGGCACTGTCACAGGTTTCATTAGAGCTAAAGATGTTGACTATTTATCTAGGATAACAGATGATGAATGGACAGGAGATGCTGTTATTTATTCCCATCTTGGTGGAGAAGTGGTTTACCTTCCGAAGGATGCAACCCTCCCAGTGACCTTGAAATCCAAAGAATATGAAGTTTTCACAATAGTTCCCGTGAAGGACTTGAACAATGACATCAAATTTTCTCCTATTGGTTTAATAAAGATGTTCAATTCAGGAGGGGCTGTCAAAGAATTCTTCAGTTTGGGATCTAATGAAAGTACAAATGTAGCTATGAAAGTTCGTGGTTGTGGCCAATTTGGTGCTTATTCATCAGTTCGGCCTAAGTTGATAACTGTGGATTCAGAAGAAGTAGAATTCAAGTATGAGGAAGAAACTGGATTGGTGACTGTTGAATTGAGAGTACCCGAGAAAGAGTTATACCAATGGAGTATTTCCATTGATTTTTGA 2271 0.4302 MTVGAGISVADGNLMVLGKKVLSHVHDNVVVNPACGGALLNGAFIGVESHQKGSRTVFPIGKLEGLRFMCVFRFKMWWMTQRMGTCGKEVPFETQFLLVEAQSGSDIDAGEGQTAATYAVFLPLLEGDFRAVLQGNDQNEIEICVESGCPAVEDFDGTHLVYIGAGSDPYEVITNSVKAVEKHLHTFAHRERKKMPDILNWFGWCTWDAFYTNVTSENVKQGLQSFEKGGIPAKFVIIDDGWQSVDMDPNGTEWKSDHAANFANRLTNIKENHKFQKDGKEGERVEDPALGLRHITNEIKQEHDIKYVYVWHAITGYWGGVKPGVTGMEHYDSKMAFPVSSPGVESNQPDEALATIAINGLGLVNPEKVFHFYDELHSYLASAGIDGVKVDVQNILETLGAGHGGRVKLARKYHQALEASISRNFPDNGIICCMSHNTDGLYSAKRSAVIRASDDFWPRDPASHTIHIASVAYNTIFLGEFMQPDWDMFHSLHPMAEYHAAARSVGGCPIYVSDKPGHHDFDLLKKLVLPDGSILRAKLPGRPTKDCLFTDPARDGKSLLKIWNMNDFSGVVAVFNCQGAGWCKVDKKNLIHDDNPGTVTGFIRAKDVDYLSRITDDEWTGDAVIYSHLGGEVVYLPKDATLPVTLKSKEYEVFTIVPVKDLNNDIKFSPIGLIKMFNSGGAVKEFFSLGSNESTNVAMKVRGCGQFGAYSSVRPKLITVDSEEVEFKYEEETGLVTVELRVPEKELYQWSISIDF 756
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03020 756 SUPERFAMILY (Trans)glycosidases 196 527 IPR017853 -
Viun8g03020 756 FunFam Probable galactinol--sucrose galactosyltransferase 1 199 526 - -
Viun8g03020 756 Pfam Raffinose synthase or seed imbibition protein Sip1 7 739 IPR008811 -
Viun8g03020 756 Gene3D Aldolase class I 199 526 IPR013785 -
Viun8g03020 756 PANTHER - 1 753 IPR008811 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03020 Viun-Chr8 37443629 37447855 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03020 1 754 Glycoside Hydrolase AT1G55740 71.391 0.0 1110
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03020 K06617 - gmx:100785506 1450.26
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g03020 8 37443629 37447855 Viun8g03020 8 37443629 37447855 ECH