Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g03002 ATGGAGCTTTTGGGTTCACTATGGAGAGGAGGACGAAGGTTTATGAAAAGGAAAGACAGTGATGCTGGTGATGCAGGTAGAGCACTGGAAGAACTCAGAGCTTCACTCTACAATGAGATCAGAACCTCAGAAGGAGCAAAGCGACAACAGCAAAAATATTGTGGACCAGTGGTGGCACTGTCCTTCAACTTTATGGTTGCTGTCGGAATTATCATGGCAAACAAATTGGTGATGGGTAAAGTTGGCTTCAACTTCCCAATTTTTCTGACATTTGTACACTACATTACTGCATGGGTTCTACTTGCCATTTTCAAGACACTCTCAGTGCTTCCTGTGTCTCCTCCATCCAAAACAACTCCATTCTCTTCTTTATTTGCACTTGGTGCTGTCATGGCTTTTGCCTCTGGCCTTGCAAACACTAGCCTCCAGTATAACAGTGTTGGTTTCTACCAAATGGCTAAGATTGCTGTCACCCCTACAATTGTTCTTGCGGAGTTCATTCTATTTAGAAAAACCATTTCTTTTAAAAAGGTTTTGGCTTTGGCTGTTGTGTCAGCAGGTGTAGCAGTTGCAACTGTGACAGATTTAGAGTTCAATTTATTTGGTGCTCTAATTGCAATTGCATGGATAATCCCAAGTGCCATAAACAAAATTTTGTGGTCTACTTTACAACAGCAGGGCAACTGGACAGCTCTGGCGTTGATGTGGAAGACAACCCCTGTCACAATTTTCTTCCTTGGGGCATTGATGCCGTGGATTGATCCACCAGGAGTCCTATCCTTCAAGTGGGATGTGAACAATTCAACTGCTGTTTTAGTATCTGCTCTCCTTGGTTTTCTCTTGCAATGGTCAGGGGCATTGGCATTGGGGGCCACTTCTGCTACAACTCATGTTGTTTTAGGACAGTTTAAGACCTGTGTGATTCTGTTGGGAGGGTTCATATTATTCAAGTCTGATCCTGGGGTTGTGAGCATTGGTGGTGCTGTTGTTGCTCTCTCTGGGATGTCAGTGTACACATCATTGAATTTGCAAGGGTCTCAGGAAAATATGCAACAAATTTTGCCTTCACCGAAGCCGAAATCAATTCCTGATGACAGCACAGATTTTAATGTAAATACTAACGGCAGCACCATTGTCTGA 1140 0.4333 MELLGSLWRGGRRFMKRKDSDAGDAGRALEELRASLYNEIRTSEGAKRQQQKYCGPVVALSFNFMVAVGIIMANKLVMGKVGFNFPIFLTFVHYITAWVLLAIFKTLSVLPVSPPSKTTPFSSLFALGAVMAFASGLANTSLQYNSVGFYQMAKIAVTPTIVLAEFILFRKTISFKKVLALAVVSAGVAVATVTDLEFNLFGALIAIAWIIPSAINKILWSTLQQQGNWTALALMWKTTPVTIFFLGALMPWIDPPGVLSFKWDVNNSTAVLVSALLGFLLQWSGALALGATSATTHVVLGQFKTCVILLGGFILFKSDPGVVSIGGAVVALSGMSVYTSLNLQGSQENMQQILPSPKPKSIPDDSTDFNVNTNGSTIV 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g03002 379 Pfam Triose-phosphate Transporter family 64 338 IPR004853 -
Viun8g03002 379 SUPERFAMILY Multidrug resistance efflux transporter EmrE 96 194 - -
Viun8g03002 379 PANTHER SOLUTE CARRIER FAMILY 35 58 341 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g03002 Viun-Chr8 37337174 37340155 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g03002 68 349 Organic Solute Cotransporters AT1G77610 23.973 4.19e-19 85.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g03002 - - gmx:100782555 628.246
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g03002 8 37337174 37340155 Viun8g03002 8 37337174 37340155 ECH