Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02977 ATGGCGCCGGTGGCAGCGAGAGGCGCAGGCGCCGTTGGTGTTGGTGTCGCAATCTTCATCTCAGTCGCTCTCACCACCTATTTCATCTGTGACCGCCGCTCCAAGAAGAAGAACATATCAAGGAAGAACGGGCTCGTGGAGGCCATCGGTAACACCCCTCTCATTCGGATCAACAGTCTCTCCGCCGCCACTGGCTGTCAAATTCTCGGCAAGTGCGAGTTCTTGAATCCCGGAGGCAGCGTCAAGGACCGTGTTGCTCTTCAAATAATTCAAGAGGCTCTGGAATCTGGCCAGCTACGTCCAGGTGGAATAGTTACTGAAGGGAGTGCTGGAAGTACTGCCATTAGCATTGCTACTGTTGCTCCTGCCTATGGGTGCAAGGCCCACGTGGTTATACCAGATGATGCTGCCATTGAGAAGTCTCAAATACTTGAAGCCCTTGGGGCAACTGTTGAAAGAGTGCGACCAGTGTCCATTACTCACAAAGACCATTTTGTAAATATCGCAAGAAGACGGGCATCTGAAGCAAATGAGTTTGCGCTGAAACCGAAAAATTTACAACTGAATGACAAGGACACTGCGAAAATAAATGGTTATGAATCTGATGGATACCATTATAGCTCTCTGTTTCCTAGTGACTGCCAAGGTGGGTTTTTTGCAGATCAGTTTGAAAACTTAGCGAACTTCAGGGCCCATTACCAGGGTACAGGGCCTGAGATTTGGGAACAGACCAATGGAAAGTTAGACGCATTTGTTGCAGCAGCAGGCACTGGTGGCACTGTGGCTGGTGTTTCTACGTTTCTTCAGGAAAAGAATCCAGAAATCAAATGCTTCCTCGTAGATCCTCCAGGTTCTGGTTTGTATAATAAGGTAACTCGGGGAGTGATGTACACCAAAGAGGAGGCTGAAGGAAAAAGACTCAAGAATCCATTTGACACTATAACTGAAGGAATTGGAATTAACAGGATAACAAAGAATTTTGCGATGGTAAAACTTAATGGCGCCTTTAGAGGCACCGATAGGGAGGCTGTTGAAATGGCTAGGTTTCTTTTGAAGAACGATGGACTCTTCCTCGGGAGTTCATCTGCAATGAACTGTGTCGGAGCAGTTAGAGTAGCACAGGCAATTGGCCCTGGCCATACCATTGTGACCATACTCTGCGATAGTGGAATGAGACATTTGAGCAAGTTCTATAATGCTGAATACTTGTCTGAGCTGGGTTTGACACCGAAAGCAGCTGGATTGGAGTTCTTAGGCATCGAATGA 1266 0.4739 MAPVAARGAGAVGVGVAIFISVALTTYFICDRRSKKKNISRKNGLVEAIGNTPLIRINSLSAATGCQILGKCEFLNPGGSVKDRVALQIIQEALESGQLRPGGIVTEGSAGSTAISIATVAPAYGCKAHVVIPDDAAIEKSQILEALGATVERVRPVSITHKDHFVNIARRRASEANEFALKPKNLQLNDKDTAKINGYESDGYHYSSLFPSDCQGGFFADQFENLANFRAHYQGTGPEIWEQTNGKLDAFVAAAGTGGTVAGVSTFLQEKNPEIKCFLVDPPGSGLYNKVTRGVMYTKEEAEGKRLKNPFDTITEGIGINRITKNFAMVKLNGAFRGTDREAVEMARFLLKNDGLFLGSSSAMNCVGAVRVAQAIGPGHTIVTILCDSGMRHLSKFYNAEYLSELGLTPKAAGLEFLGIE 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02977 421 ProSitePatterns Cysteine synthase/cystathionine beta-synthase P-phosphate attachment site. 71 89 IPR001216 GO:0006535
Viun8g02977 421 FunFam Cysteine synthase 230 394 - -
Viun8g02977 421 Pfam Pyridoxal-phosphate dependent enzyme 48 388 IPR001926 -
Viun8g02977 421 FunFam Cysteine synthase, putative 49 78 - -
Viun8g02977 421 SUPERFAMILY Tryptophan synthase beta subunit-like PLP-dependent enzymes 40 402 IPR036052 -
Viun8g02977 421 Gene3D - 49 394 IPR036052 -
Viun8g02977 421 PANTHER CYSTATHIONINE BETA-SYNTHASE 44 403 - -
Viun8g02977 421 CDD CBS_like 50 395 - -
Viun8g02977 421 Gene3D - 79 229 IPR036052 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02977 Viun-Chr8 37211039 37213543 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02977 40 395 Miscellaneous Gene Families AT3G04940 29.330 3.86e-33 125
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02977 K01738 - gmx:100799081 714.531
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02977 8 37211039 37213543 Viun8g02977 8 37211039 37213543 ECH