Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02892 ATGGCCAACGAAAACGAACCCGCGAAGCTGCTGTTACCATATCTTCAACGCGCCGATGAATTGCAAAAGCACGAACCACTCGTCGCCTATTACTGTCGATTATATGCGATGGAACGGGGGTTGAAGATTCCGCAAAGTGAGCGCACAAAGACCACTAATGCTCTTCTCGTCTCGCTCATGAAGCAGCTTGAGAAGGATAAAAAATCCATCCAGATAGGGCCTGAGGACAATTTATATCTCGAGGGTTTTGCTTTGAATGTGTTTGGAAAGGCAGACAAACAAGATCGTGCTGGAAGAGCAGATTTGAATACGGCGAAGACATTTTATGCTGCCAGCATCTTTTTTGAGATTCTTAATCAATTTGGAGCAGTTCAGCCTGATCTGGAGCAGAAACAGAAATATGCAGTGTGGAAAGCAGCTGATATAAGAAAAGCTTTGAAAGAAGGAAGAAAGCCCATAGCTGGTCCGCCTGCTGGTGATGAGGATCTGTCAATTCCATTCAGTTCTTCAAGTGATAGATATGACCCTGGGACTACTGAAACTACAGTTTCTAGTCCTGGACCAGAATCTGATTCATCACCAAGTTATCATAATCCTGCTAATTACCAGAATCCAAATATTCATCCGGCTCCTAAATTTCATGATACTGTTAATGAACAGCATTCTGCAAATATTCCACCATCTATGCAATTTCATGACAGAGTAGATAACAACAAGCATTCTTCTGTTGTTTCTCCATCATCTCACTCTTACACACCTGGAGTTTATCCTTCCCAAGACTATCCTCCTGCTCCTCCACCTTCCCAAGACTATCATCCTCCTCCACCTTCCCAAGACTTTCATTCTCCTCCACCTTCCCAGGACTATCATTCTCCTCCCCCTTCCCAGGACTATCATCCTCCACCACCTTCCCAAGATTATCATCCTCCACCGTCATCCCAAGATTACCATCCTCCACCTGCCAGGTCAGAAAGTTCTTATCACGAACTTTACAACCATCAGCAATACTCATCGGAGAATTCACAGCATTTAGGGCCTAACTACCCTTCTCATGAAAATTCCTCTTATTCCTATCCCCATTTTCAGTCTTATCCAAGTTTTTCAGAAAGCAGCATCCCATCAGTCCCATCAAACTATACTTATTATCAAGGGTCGGATGCTTCATATTCTTCCCAGTCAGCTCCGCTAACTACAAGCCATTCAGCGAGTGCTCATCACAGTTCTAGCAGCAGAAATGGAACTACTGTGGAACCTAAATCAACTACTCAGACATACCATTATGACAGTAACTACCAGCCAGCACCTGAAAAAATAGCGGAGGCACACAAGGCTGCAAGATTTGCTGTTGGAGCACTTGCATTTGATGATGTCTCAATTGCAGTAGACTACTTGAAGAAATCACTTGAGTTGCTGACAAATCCATCCGCTGGCCAGTAA 1437 0.4398 MANENEPAKLLLPYLQRADELQKHEPLVAYYCRLYAMERGLKIPQSERTKTTNALLVSLMKQLEKDKKSIQIGPEDNLYLEGFALNVFGKADKQDRAGRADLNTAKTFYAASIFFEILNQFGAVQPDLEQKQKYAVWKAADIRKALKEGRKPIAGPPAGDEDLSIPFSSSSDRYDPGTTETTVSSPGPESDSSPSYHNPANYQNPNIHPAPKFHDTVNEQHSANIPPSMQFHDRVDNNKHSSVVSPSSHSYTPGVYPSQDYPPAPPPSQDYHPPPPSQDFHSPPPSQDYHSPPPSQDYHPPPPSQDYHPPPSSQDYHPPPARSESSYHELYNHQQYSSENSQHLGPNYPSHENSSYSYPHFQSYPSFSESSIPSVPSNYTYYQGSDASYSSQSAPLTTSHSASAHHSSSSRNGTTVEPKSTTQTYHYDSNYQPAPEKIAEAHKAARFAVGALAFDDVSIAVDYLKKSLELLTNPSAGQ 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02892 478 MobiDBLite consensus disorder prediction 164 205 - -
Viun8g02892 478 MobiDBLite consensus disorder prediction 240 255 - -
Viun8g02892 478 Gene3D - 4 152 IPR023175 -
Viun8g02892 478 Pfam Vta1 C-terminal domain 435 472 IPR041212 -
Viun8g02892 478 MobiDBLite consensus disorder prediction 148 356 - -
Viun8g02892 478 MobiDBLite consensus disorder prediction 375 433 - -
Viun8g02892 478 Pfam Vta1 like 13 148 IPR039431 -
Viun8g02892 478 Gene3D Immunoglobulin FC, subunit C 434 473 - -
Viun8g02892 478 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN VTA1 HOMOLOG 292 474 IPR044538 GO:0032511
Viun8g02892 478 MobiDBLite consensus disorder prediction 258 317 - -
Viun8g02892 478 MobiDBLite consensus disorder prediction 375 430 - -
Viun8g02892 478 MobiDBLite consensus disorder prediction 327 356 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02892 1 118 Glycosyltransferase AT2G31960 25.984 1.13e-07 52.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02892 K12199 - gmx:100783739 773.081
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02892 8 36804877 36807864 Viun8g02892 8 36804877 36807864 ECH