Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02890 ATGGATAACTGTAATTCGCCTAGAACGCCGAGTTTTCGGCAAAGGAGACGCTCAAATGAGATTCCTGCAGAGATAAACAAATCAAATGGAAGCATTTTACTGGTGGATGATAAATATAAATACAGATCAATGTGGATTCGTGCATACTCATCTCTGTGGATGTTAGCTAGTGTCTCACTTATCATTTACTTAGGTCATCTTTACATCTGGGCCATGGTTGTTGTTATCCAAATATTCATGGCCAGTGAGCTCTTCAATCTACTTACAAGAGCAACTCAAGATAGACGTCTCCCAAAGTTCAAGTTCTTGAACTGGCACTTTTTCTTCACAGCAATGCTTTTCGTATATGGCCGTATTCTCAGTCAACAACTTGTGAATACAGTGACCTCAGACAAATTCTTGTATAGGCTTGTGAGCAATCTGATCAAGTATCAGATGGTTATATGTTACTTCCTATATATTGCAGGTTTTGTATGGTTTATTCTTTCATTGAAGAAGAGATATTACAAGTATCAGTTTGGCCAGTATGCATGGACACATATGATACTCATTGTTGTGTTTACCCAGTCTGCGTTCACTGTAGCCAACATATTTGAAGGGATATTCTGGTTTATTTTCCCTGCATCCCTAATTGCTATGAATGATGTTGGCGCATATTTCTTCGGTTTCTATTTTGGGAGAACACCTCTGATCAAGCTTTCTCCAAAGAAAACATGGGAAGGTTTTATTGGAGCATCTGTAGCCACTATGTTTGCTGCGTTTACATTTGCATACTTCTTGGGTCGCTTCCAATGGCTAACATGTCCAAGGAAGGATTTATCAACTAGTTGGCTTCAGTGTGACCCTGACCCAATTTTTAAGCCAGAGTACATTCCATTGCCAGGACTAATTTCTCATTCGCTTCCTTGGAAAGAGATACCAGTTTTGCCAGTACAGTGGCATGCCTTGTGGTTGGGACTATTTGCATCAATCATAGCACCATTTGGAGGTTTTTTTGCCAGTGGTTTCAAAAGAGCCTTTAAAATCAAAGACTTTGGTGACAGTATACCGGGACATGGTGGGTTTACAGACAGAATGGACTGCCAGATGGTAATGGCTGTTTTTGTCTACATATACCATCAATCATTTGTTGTCGCCGAAGACTATTCAGTAGAAATGCTTTTGGACCAGATATTGAGAAACCTTGGTTTAGAGGAGCAACTAGCTCTCTACGCAAAACTTGGACAGATATTGCAAGAAAGGCGTTTATGA 1251 0.3997 MDNCNSPRTPSFRQRRRSNEIPAEINKSNGSILLVDDKYKYRSMWIRAYSSLWMLASVSLIIYLGHLYIWAMVVVIQIFMASELFNLLTRATQDRRLPKFKFLNWHFFFTAMLFVYGRILSQQLVNTVTSDKFLYRLVSNLIKYQMVICYFLYIAGFVWFILSLKKRYYKYQFGQYAWTHMILIVVFTQSAFTVANIFEGIFWFIFPASLIAMNDVGAYFFGFYFGRTPLIKLSPKKTWEGFIGASVATMFAAFTFAYFLGRFQWLTCPRKDLSTSWLQCDPDPIFKPEYIPLPGLISHSLPWKEIPVLPVQWHALWLGLFASIIAPFGGFFASGFKRAFKIKDFGDSIPGHGGFTDRMDCQMVMAVFVYIYHQSFVVAEDYSVEMLLDQILRNLGLEEQLALYAKLGQILQERRL 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02890 416 Pfam Cytidylyltransferase family 46 376 - -
Viun8g02890 416 PANTHER PHOSPHATIDATE CYTIDYLYLTRANSFERASE 14 414 IPR016720 GO:0004605
Viun8g02890 416 PIRSF CDP-DAG_synth_e 3 416 IPR016720 GO:0004605
Viun8g02890 416 ProSitePatterns Phosphatidate cytidylyltransferase signature. 334 360 IPR000374 GO:0016020|GO:0016772
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02890 Viun-Chr8 36787515 36791984 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02890 5 414 Lipid Metabolism Gene Families AT4G26770 76.066 0.0 646
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02890 K00981 - gmx:100805363 778.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02890 8 36787515 36791984 Viun8g02890 8 36787515 36791984 ECH