Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02889 ATGGAACTCTGCACTCGAACCTTCACAAGTTCTCTTCTTTCCAATTCTTTTTTCTCTTCAAACAAAAGTCTTCTCTCTGCTAATGCCAACACTTCAATCTTCAAATTCAATTCCCTTAAATTCTCGTCCTTGGCACCTCATGTTCATTTCTTTCAACCCTTTATCGTTCGTTACAATTCTTTCTCTTCTCCCTTCACAGTCTCAGCTGCTGCTTCTTCTTCCTCAGTTGAAGTTGGCACAGAACAGCAGGACCGTCTTCCGGCAGAACTGAAGGTCACAGAAACAGAGAAAATAAAATCCACTGTTAAATTGCATGTGGAGGTGCCACCATTGGTAATTGAGGATTGTTACAAAAGGGTCATAGCAGAGTTTATGAAACAAGCAAAGATCCCTGGATTTCGTCCTGGAAAGAAAGTTCCAGAAGACATTCTTATTGGTTATGTTGGGAGACAAAATGTCCAGAAGGCTACTATTGAATCTATATTAAGAAGGACACTTTCACATGCTATGATATCGGTTAGTGGGAAGGCTTTGCAAGACTCAGTACGCATAGTTACTAAGTTTCCTGAGATGGAGGAGACATTTTCTCTTCAAGAGTTTTTTAGATATGATGTGGTTTTTGATATTGCACCAGAAATCAAATGGATTCCTGATAATAATGCATACAAAAATTTAAAGATTGTTGTTGAGATAGATAGTGATATAGATGCTCAAATAGCATCTGAACAAGAATTTAGAAGGCGTTACAAGTCCATTGGTGCACTGAAAGTGGTTACTGATAGAGGGTTACAGGTTGGTGATATTGCTGTTCTTGACATCTCAGCAACAACCATCGATCAAGATGAATCAAATGTTAAAAGTATTCCTTCGGCTGAAAGTAAAGGCTTTAATTTTGACACAGAATACGGGGACAAGGTATTACCGGGTTTCCTTGATTCAATAATTGGAATTCATCGCGGTGAATCAAAGTCTTTTCCTCTTGTATTTCCTGAAACATGGAATCAAGAAAATCTTCGAGGTGTTCATGCTCAGTTCAATGTTGAATGCAAAGAACTTTTTTACAGAGATTTGCCAGAACTGGATGATTCTATTGCTGATAAGCTTCTCCCTGGATGCAGCACAGTGGAGCAGGTCAAAGACTTATTGTTACAGAGATGCCTAGAGGTGGAGCAAACAGCTAGAGAACAAGCAACAGATAATGCTATCTTAGATCAGATTTCTAAGATGGTAGAAGTTGATATACCTCAATCCTTGTTTGAGGAACAAGGTAGGCAGCTTTATGGAGCCAACCTATTAGAAATACAGGCAAAAATGAAACTAAATGAGCAACAGCTGGCATCTCTCTCAAGTCCAAAGGCTGTGAACCAATATCTTGAGCATCAGAAGGAAAATATAACAAATTTGATAAAACAGAATCTGGCAGTGGGTGATATATATAGGCGTGAAAATCTGCAGTTTGCTACCGAGGATCTCGTCAAAGAGGTTGAGAATTCCATTGCTGAATTCAAACGTCAAAATCAAGAATATGATGAGGAACGGGTGAAGAATCAGGTTCAAGAAATACTAGAAGGAGCTAAAGTGCTTGAATGGTTGAGAGAACATGCAGAGATTCAATATATAACTAGATGA 1629 0.3867 MELCTRTFTSSLLSNSFFSSNKSLLSANANTSIFKFNSLKFSSLAPHVHFFQPFIVRYNSFSSPFTVSAAASSSSVEVGTEQQDRLPAELKVTETEKIKSTVKLHVEVPPLVIEDCYKRVIAEFMKQAKIPGFRPGKKVPEDILIGYVGRQNVQKATIESILRRTLSHAMISVSGKALQDSVRIVTKFPEMEETFSLQEFFRYDVVFDIAPEIKWIPDNNAYKNLKIVVEIDSDIDAQIASEQEFRRRYKSIGALKVVTDRGLQVGDIAVLDISATTIDQDESNVKSIPSAESKGFNFDTEYGDKVLPGFLDSIIGIHRGESKSFPLVFPETWNQENLRGVHAQFNVECKELFYRDLPELDDSIADKLLPGCSTVEQVKDLLLQRCLEVEQTAREQATDNAILDQISKMVEVDIPQSLFEEQGRQLYGANLLEIQAKMKLNEQQLASLSSPKAVNQYLEHQKENITNLIKQNLAVGDIYRRENLQFATEDLVKEVENSIAEFKRQNQEYDEERVKNQVQEILEGAKVLEWLREHAEIQYITR 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02889 542 PANTHER TRIGGER FACTOR CHAPERONE AND PEPTIDYL-PROLYL CIS/TRANS ISOMERASE 61 524 IPR005215 GO:0015031
Viun8g02889 542 Hamap Trigger factor [tig]. 90 538 IPR005215 GO:0015031
Viun8g02889 542 SUPERFAMILY FKBP-like 256 361 - -
Viun8g02889 542 Pfam Bacterial trigger factor protein (TF) C-terminus 374 531 IPR008880 GO:0006457|GO:0015031
Viun8g02889 542 FunFam Trigger factor 256 358 - -
Viun8g02889 542 FunFam Trigger factor 90 213 - -
Viun8g02889 542 SUPERFAMILY Triger factor/SurA peptide-binding domain-like 360 538 IPR027304 -
Viun8g02889 542 Gene3D - 88 213 IPR036611 GO:0006457|GO:0015031
Viun8g02889 542 Pfam Bacterial trigger factor protein (TF) 92 239 IPR008881 GO:0006457|GO:0015031
Viun8g02889 542 Gene3D - 221 537 IPR037041 GO:0006457|GO:0015031
Viun8g02889 542 Coils Coil 492 512 - -
Viun8g02889 542 Gene3D - 251 358 IPR046357 GO:0003755
Viun8g02889 542 FunFam Chloroplast trigger factor 336 537 - -
Viun8g02889 542 SUPERFAMILY Trigger factor ribosome-binding domain 91 218 IPR036611 GO:0006457|GO:0015031
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02889 K03545 - gmx:100812597 866.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02889 8 36782319 36787402 Viun8g02889 8 36782319 36787402 ECH