Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02871 ATGAAGAAAGAGAAGGTTCAGATACGGTATTTGGCACCATGTATTTGGTTACTCTCTTTCACCACAATCTTCCTCCATTTATGTGAGTCCTTCAACTATGGCCAAGCCCTGTCACAGAGCCTACTCTATTTCGAGTCGCAGCGTTCAGGACGCTTACCCTACAACCAAAGGGTCACTTGGCGTCACCATTCTGCCCTCACCGATGGCCTAGAACAAGGGGTGGACTTGGTGGGAGGGTACTATGATGCAGGGGACAACGTGAAATTCGGTTTGCCGATGGCATTCACCGTCACACTCCTCTCGTGGGCTGCCATAGAGTACGGCCAACAAATCGCAGCGGCCGGCGAGTACGCTCACACGCTCGAGGCCATCAAGTGGGGAACGGACTATTTCATAAAGGCCCACACACACCCCAATGTTCTTTGGGTTGAGGTGGGTGACGGCTACACCGATCACTACTGTTGGCAGCGGCCGGAGGACATGACGACGTCACGGCGAGCTTACAAGGTTGACGGCGACAACCCTGGGTCGGATGTGGCCGGCGAGACCGCGGCGGCGTTGGCGGCGGCATCCATGGTGTTTAGGAGAACAAATCCACATTACTCTCAACAACTTTTGCATCATGCAGAACAGTTGTTTGAGTTTGGTGACAAATACAAAGGGAAGTATGATGAGAGTGTTGGAGTGGCTAAAGGGTATTATACTTCCGTTAGTGGCTACATGGACGAGTTGCTGTGGGCAGCTATTTGGCTTTATAAGGCCACAGAGAAGGACCAATATTTAAACTATTTTGTGGAGAAGGCTCATGACTTTGGTGGGACCACTTGGGCCATCAGTGAGTTCAGCTGGGATGTTAAATATGCTGGTGTTCAAGCCATTGCTTCCATGTTATCAACGGAAGAAAAGAAACACAAGCAGCATGAAGTCGTACTTAAACAGTATCGTTCAAAAGCCGAGCACTATCTCTGCGCGTGCCTCAACCTCAACAACGTGAGTAACGTGGAGCGCACCCCAGGGGTATTGTACACCCGCCAATGGAACAACATGCAGTACGTGGCAACGGCGTCGTTTCTTCTCACACTGTATTCTGATCACCTCCAAGCCACACATCAGAAGCTGCATTGCGAAAGGGGAGAGGTGGGTCCACACGAGATGTTTGCCTTTGCGAAATCACAGGTTGATTACATCTTAGGATCTAATCCAATGGGTATGAGTTACTTGGTAGGCTACGGTCCCGATTTCCCCCAGAGGGTGCACCATAGGGGCGCATCCATTGAATCATCAAAGGAAAACAAGGGTTTTATTGGGTGCATTCAGGGTTATGATAGCTGGTATGGACGCGGTGAACCCAATCCAAATGTACTAATTGGGGCCCTCGTTGGTGGGCCTGACATCAAAGACCAATTTAAAGATGAGAGATCAAATTACGTCCAAACAGAGGCATGCACCTACAACACTGCAGCTTTAGTAGGGGTTTTTGCTAGATTGCATCATCAGTCACATGGTGATGTTCATCACAATAAAACCCCTTTGATAGCTTCTAGCTAG 1548 0.4948 MKKEKVQIRYLAPCIWLLSFTTIFLHLCESFNYGQALSQSLLYFESQRSGRLPYNQRVTWRHHSALTDGLEQGVDLVGGYYDAGDNVKFGLPMAFTVTLLSWAAIEYGQQIAAAGEYAHTLEAIKWGTDYFIKAHTHPNVLWVEVGDGYTDHYCWQRPEDMTTSRRAYKVDGDNPGSDVAGETAAALAAASMVFRRTNPHYSQQLLHHAEQLFEFGDKYKGKYDESVGVAKGYYTSVSGYMDELLWAAIWLYKATEKDQYLNYFVEKAHDFGGTTWAISEFSWDVKYAGVQAIASMLSTEEKKHKQHEVVLKQYRSKAEHYLCACLNLNNVSNVERTPGGXLYTRQWNNMQYVATASFLLTLYSDHLQATHQKLHCERGEVGPHEMFAFAKSQVDYILGSNPMGMSYLVGYGPDFPQRVHHRGASIESSKENKGFIGCIQGYDSWYGRGEPNPNVLIGALVGGPDIKDQFKDERSNYVQTEACTYNTAALVGVFARLHHQSHGDVHHNKTPLIASS 516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02871 516 PANTHER ENDO-1,4-BETA-GLUCANASE 26 500 - -
Viun8g02871 516 Gene3D - 29 501 IPR012341 GO:0005975
Viun8g02871 516 Pfam Glycosyl hydrolase family 9 33 493 IPR001701 GO:0004553|GO:0005975
Viun8g02871 516 ProSitePatterns Glycosyl hydrolases family 9 (GH9) active site signature 2. 396 422 IPR018221 -
Viun8g02871 516 FunFam Endoglucanase 29 502 - -
Viun8g02871 516 SUPERFAMILY Six-hairpin glycosidases 30 510 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02871 Viun-Chr8 36626108 36629929 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02871 31 496 Glycoside Hydrolase AT2G32990 75.589 0.0 745
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02871 - - gmx:100786912 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02871 8 36626108 36629929 Viun8g02871 8 36626108 36629929 ECH