Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02833 ATGTTTGGTGTCGTAAGGCGGAGGGTTGCTTCTGGCAGCCCGTCTCCTTGGCTTCTAGGGCAGTCAGTTCAGAAAATTCGGTCTGGCCTTTCTGTTTCTGCGAGAGTTTCTTCCACTGTTGAGAAAGAGATTGCGTCAGGCGGATGTGGATTTGTAAGGAACTTTTGTAATATAACACCAGGATGCGGGATTAATTCTAAAGCTATGAGTGTGGTTTTTCATCCAAGGTCCGCAGCTGTTCGAACCTGGGGGCGTTCATTTTCTTCAGACAGTGGAGATACGGTTGATGTTGTGGTCCCTCCTCTAGCTGAATCTATCTCTGATGGAACTCTGGCAAATTTTTTGAAGAGGCCTGGTGACAGGGTTAATGCTGATGAGCCAATTGCTCAAATTGAAACAGATAAGGTGACAATCGATGTTTCAAGTCCGGAGTCGGGTGTCATTCTGAAGTTTCTAGCCAATGAAGGAGATACTGTTGAGCCAGGTAACAAGATAGCAATCATTTCAAGGTCTGCTGATGCAACTCATGTTGCTCCATCTGAGACTACATCTGAGAAAGCAGCTCCTCAGCCAACTCAAAAGGTTAGCGAGGAGAAGAAAGCTCCCAAAGTTGAAACTCCACCTGCTAAAGAGAAGCCCAAAGCACCCCCTGCGACATTGAGTTCTCCCACTGAGCCCCAACTTCCTCCCAAAGAAAGAGAAAGACGGGTTCCTATGACAAGGCTTCGGAAACGTGTTGCTACACGGCTGAAAGATTCCCAGAACACGTTTGCTATGCTCACAACCTTCAATGAAGTTGATATGACTAATTTGATGAAGCTCCGTTCTGATTATAAGGATGCTTTTGTTGAGAAACATGGAGTCAAGTTGGGTCTTATGTCGGGCTTTGTCAAAGCTGCTGTCAATGCGCTCCAACATCAACCAATTGTCAATGCAGTCATTGATGGGGATGATATTATATACAGAGATTATATAGATATCAGCATAGCTGTTGGTACCCCGAAGGGCCTTGTTGTTCCTGTTATCCGCAATGCGGATACCATGAACTTCGCTGATATAGAAAAGCAAATCAATGCTTTTGCTAAGAAGGCAAATGATGGAACTTTATCAATTGATGAGATGGCTGGAGGCACTCTTACAATATCCAACGGTGGTGTTTATGGAAGCCTTTTGAGTACCCCTATTATCAACCCCCCTCAGTCGGCAATCTTGGGTATGCATTCCATAGTGAGCCGTCCTACGGTTGTTGGAGGAAATGTTGTCCCAAGACCATTGATGTACGTTGCTCTAACTTATGATCATAGAATTATTGATGGAAGAGAGGCAGTGTTCTTTCTGCGGCGCATCAAAGATATCGTGGAGGATCCCCGCAGGCTTTTGCTTGACATATAA 1392 0.4511 MFGVVRRRVASGSPSPWLLGQSVQKIRSGLSVSARVSSTVEKEIASGGCGFVRNFCNITPGCGINSKAMSVVFHPRSAAVRTWGRSFSSDSGDTVDVVVPPLAESISDGTLANFLKRPGDRVNADEPIAQIETDKVTIDVSSPESGVILKFLANEGDTVEPGNKIAIISRSADATHVAPSETTSEKAAPQPTQKVSEEKKAPKVETPPAKEKPKAPPATLSSPTEPQLPPKERERRVPMTRLRKRVATRLKDSQNTFAMLTTFNEVDMTNLMKLRSDYKDAFVEKHGVKLGLMSGFVKAAVNALQHQPIVNAVIDGDDIIYRDYIDISIAVGTPKGLVVPVIRNADTMNFADIEKQINAFAKKANDGTLSIDEMAGGTLTISNGGVYGSLLSTPIINPPQSAILGMHSIVSRPTVVGGNVVPRPLMYVALTYDHRIIDGREAVFFLRRIKDIVEDPRRLLLDI 463
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02833 463 Gene3D - 219 459 IPR023213 -
Viun8g02833 463 Gene3D - 93 171 - -
Viun8g02833 463 SUPERFAMILY CoA-dependent acyltransferases 233 462 - -
Viun8g02833 463 MobiDBLite consensus disorder prediction 175 246 - -
Viun8g02833 463 NCBIfam dihydrolipoyllysine-residue succinyltransferase 205 462 IPR006255 GO:0004149|GO:0006099|GO:0045252
Viun8g02833 463 MobiDBLite consensus disorder prediction 228 246 - -
Viun8g02833 463 SUPERFAMILY Single hybrid motif 94 186 IPR011053 -
Viun8g02833 463 ProSitePatterns 2-oxo acid dehydrogenases acyltransferase component lipoyl binding site. 119 148 IPR003016 -
Viun8g02833 463 MobiDBLite consensus disorder prediction 192 210 - -
Viun8g02833 463 ProSiteProfiles Biotinyl/lipoyl domain profile. 94 169 IPR000089 -
Viun8g02833 463 FunFam Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex, mitochondrial 226 461 - -
Viun8g02833 463 CDD lipoyl_domain 95 168 - -
Viun8g02833 463 PANTHER DIHYDROLIPOYLLYSINE-RESIDUE SUCCINYLTRANSFERASE COMPONENT OF 2-OXOGLUTARATE DEHYDROGENASE COMPLEX, MITOCHONDRIAL-RELATED 54 462 - -
Viun8g02833 463 Pfam Biotin-requiring enzyme 96 168 IPR000089 -
Viun8g02833 463 Pfam 2-oxoacid dehydrogenases acyltransferase (catalytic domain) 233 461 IPR001078 GO:0016746
Viun8g02833 463 MobiDBLite consensus disorder prediction 175 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02833 Viun-Chr8 36518751 36524503 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02833 72 461 Acyl Lipid Metabolism Gene Families AT1G54220 28.289 2.18e-41 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02833 K00658 - gmx:100799149 794.653
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02833 8 36518751 36524503 Viun8g02833 8 36518751 36524503 ECH