Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02457 ATGAATCCTGGAAATTTTGAGGAGGAGCTGTCGTACAATTCATCAGATGAAGTGAGTGAGTATCTGGCGGAGTACACGTTGGAAGGGAAATGGCAGAAGGTTGTGAACATGTACAACCGATTCCAAGCGTGTCACACGGCAATGATTAACCATTCCGTGGGCACTGCACTGCATGTGGCGGTGGATTTGGACGAAGAAGAGGTGGTTGAAAAGCTTGTGAATGCCATTATCAGACACAAGACGATGAAGGCTCTGGAAATGGAGAACGATCGAGGGGATACCCCTCTGCATGTTGCGGCTTCAAGGGGTTTCGCAAAGATATGTAAGTGGATCATAGGAACCAACAAGGAGAGGATTTACTTGGTGAGTCGAAAAAACAAACATGGAGAGACACCACTCTTTGAAGCTGCTATCAACTGGAAGAAACAGGCCTTTGCTTATCTTTCTAACCTTTCTGACCACAGTGCTCCATTGCAAGATCTTGTGCGACACAATGGTGACACTATTCTTCATTGTGCTATCAGAAGAGAGTATTTCGATTTGGCTGTGATAATAATGCATTACTATGATTTCCTTAGCACACATAAGAATAAAGAGGGTTTCACTCCTCTCAAACTCCTTGCAACCAGATCCTCGGCTTTCAGAAGTGCTACCAACCTGTCATGGTGGAAGCGAATTCTGTACCACTGTATACTTGTAGAACCACTGGACCCTGAAAAACAAATGAAGGCGAATCTGGGAAAGATAAGGGAGAATCCCAAGTCTGATCAAGAGGAATATCCAAAGAACTATGCCACATTACATGATTTCTTTGCTCGATCGTTTAATGTTGCTGCTCTATTTGGGAAAATGCCGACGAGAAAGAATAAGCACGACTCAGAAAACCCATCATCCAAAAAGTGTACCATTGAATTGGGAACTCCCAAGGTTGGATTTTTGCCACCAAATTATGAAACCTCTCAACAATTTGTTAGGTCTGCATATGTACATACTCTTGGCCTCTCAGGAGTGGAATTAAAGGAAATAAAAAAGACAAAGAAGAGGCATCAATGGAGCGGTCAACTCTTGAAGGCACTGTTGGAAAGACCTTACGCAGCATTTACAGGAAGTGGAGGTGTCCCAACGGATATGAAAGTTGAAACTGATATGTATAATGTATACAACGAATATAAACAAGTTGGAACCAGTGAATTAGGATGGTTGGAAGAAGAAGAAGAAGAAGAAAATAAAACAGATGTTGAAGAGAAAAAGGGTGTTGATCGCAGTGAGAGCATGAAGAAGGAATCGGATCAGCTAGCTGAAGAAGAAAAAAAGATTGACAAAAAAGAGACAGCATTTTTGGTTGCAGCAAGAAATGGCATAGTTGAAATGGTGGATGAAATGTTAAATCGAATTCCAAGTGTGATCCATAACACCAACTCAAAGAAAGAAAATGTGCTGCTTGTGGCTGTGCTGAATCGGCAACCCCTTGTTGTTGAGAGTTTGAAAACGAAGATGCAGTCAAAACTAGAAGTTTGGAATAACTTAACTCTGACAGTAGATGAAGATGAGAACACGATGTTACACTTGGCAGCATATGCTCCTGGCGGCGATAAACCTTGGCAGATAGCTGGTTCTGCCTTACAAATGGTGTGGGACATAAAGTGGTTTCAGTATATTAAAAGCCTTGTGCCACAACACTTTTACTTTAGAAGCGACAAGAAGGGAAAAACCGCAGGGGAAATCTTCGAGGAAACGCATAAAAAACTGATAAAGGAAAGTGGGGAGTGGCTGAAGGATACGTCTGAATCTTGTTCTGTGGTGGCTGCACTTGTTGCTGGTGTTTCCTTCACTGCAGCCAATACCGTCCCTGGTGGCACCAACGAAGAAGGTAGGCCTAATTTAGAAGGAAAGCCTGCATTCGATGCATTCGCCATTGCTTCGCTCGTTGGACTTTGCTTTTCCGTCACTGGTCTCATAATGTTCCTCACCATCCTCACTTCTCGAAAGCAAGCCAAAGATTTTCGCAGAGATTTGCCACTCAAGCTTCTTCTTGGCTTGAGTTCTCTTTTCGTATCCATTGCTGCAATGTTTGTTTCTTTCTGCACGGGCCATTTTTTTCTGCTTAGTCATGGATACAAGACGGTCCTATACCCCATTTATGCAGCCACTGTTTTCCCTGTCACTTTCTATGCTGTGGCACAGTTTCCTCTATACTTCGATCTTCTAACGGCCATTTTAACGACTGTTCCACGATCAAGTGATAGAGGAGACAAGTTGTAG 2262 0.4293 MNPGNFEEELSYNSSDEVSEYLAEYTLEGKWQKVVNMYNRFQACHTAMINHSVGTALHVAVDLDEEEVVEKLVNAIIRHKTMKALEMENDRGDTPLHVAASRGFAKICKWIIGTNKERIYLVSRKNKHGETPLFEAAINWKKQAFAYLSNLSDHSAPLQDLVRHNGDTILHCAIRREYFDLAVIIMHYYDFLSTHKNKEGFTPLKLLATRSSAFRSATNLSWWKRILYHCILVEPLDPEKQMKANLGKIRENPKSDQEEYPKNYATLHDFFARSFNVAALFGKMPTRKNKHDSENPSSKKCTIELGTPKVGFLPPNYETSQQFVRSAYVHTLGLSGVELKEIKKTKKRHQWSGQLLKALLERPYAAFTGSGGVPTDMKVETDMYNVYNEYKQVGTSELGWLEEEEEEENKTDVEEKKGVDRSESMKKESDQLAEEEKKIDKKETAFLVAARNGIVEMVDEMLNRIPSVIHNTNSKKENVLLVAVLNRQPLVVESLKTKMQSKLEVWNNLTLTVDEDENTMLHLAAYAPGGDKPWQIAGSALQMVWDIKWFQYIKSLVPQHFYFRSDKKGKTAGEIFEETHKKLIKESGEWLKDTSESCSVVAALVAGVSFTAANTVPGGTNEEGRPNLEGKPAFDAFAIASLVGLCFSVTGLIMFLTILTSRKQAKDFRRDLPLKLLLGLSSLFVSIAAMFVSFCTGHFFLLSHGYKTVLYPIYAATVFPVTFYAVAQFPLYFDLLTAILTTVPRSSDRGDKL 753
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02457 753 MobiDBLite consensus disorder prediction 402 436 - -
Viun8g02457 753 Gene3D - 13 226 IPR036770 -
Viun8g02457 753 PANTHER CASKIN 49 153 - -
Viun8g02457 753 SMART ANK_2a 52 82 IPR002110 GO:0005515
Viun8g02457 753 SMART ANK_2a 91 121 IPR002110 GO:0005515
Viun8g02457 753 SMART ANK_2a 128 160 IPR002110 GO:0005515
Viun8g02457 753 SMART ANK_2a 441 471 IPR002110 GO:0005515
Viun8g02457 753 SMART ANK_2a 165 196 IPR002110 GO:0005515
Viun8g02457 753 SUPERFAMILY Ankyrin repeat 42 212 IPR036770 -
Viun8g02457 753 Coils Coil 425 445 - -
Viun8g02457 753 MobiDBLite consensus disorder prediction 411 436 - -
Viun8g02457 753 Pfam Domain of unknown function 589 700 IPR026961 -
Viun8g02457 753 FunFam Uncharacterized protein 19 244 - -
Viun8g02457 753 Gene3D - 383 590 IPR036770 -
Viun8g02457 753 Pfam Ankyrin repeat 92 114 IPR002110 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02457 Viun-Chr8 34294734 34298325 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02457 431 695 Miscellaneous Gene Families AT3G12360 26.715 5.79e-09 57.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02457 - - gmx:100799438 1172.15
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02457 8 34294734 34298325 Viun8g02457 8 34294734 34298325 ECH