Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02335 ATGGGAAACAGCATGGCAACCCACAACAAATACAAAAGTTTCTTGTTCTTTATCAGAAAGTTCAAGGTCATAGAGCCAGATCCACCTCAGGACCTTGAGGAGGCGTTTTCAAAGTTCACAGGAGGAGGGTCCCACATGTCCGTGGAGCAGCTCCACCGTTTCATGGTGGAGCACCAGGGTGAAGAGCACCACACCTTATCGGATTCGGAAAAAGTTTTTGAGAGGGTTTTGCAGGAGAGAAACACATGTCAAGAAACTGTTAAGGTTGATCACCACAGAGAACATGAGATCACCCTGGATGAACTCTTTCGATTTTTGCTTCATAATGATTTCAATGGTCCCTTGAAAACTCAGGTACATCATGATATGGGTGCTCCATTGTCACATTATTTCATATATACAGGCCACAACTCCTATTTGAAAGGGAATCAACTCATCGGTGATTGCAGTGAAGTGCCAATCATAGAGGCTTTGAAAAGAGGAGTGCGTGTTATAGAACTCGATCTATGGCCAACCTACAATAAGGATGATATTAAAGTAGACCATGGATGGACTTTTACCAACCCTGTCTCAGTGGTGAAATGTCTAGAGTGCATAAAGGAATATGCTTTTGTTGCATCTCAGTACCCTGTGATCATAACCATAGAAGACCATCTTACAACAGATCTTCGAGCTGAATTTGTAGAATTGGTGACTCAAATATTTGGGGAAGTGCTTTATTACCCTGGGGAAGAGTGCTGCTTAACAGAATTCCCTTCACCAGAATCACTGAAAAACCGAGTTATTATATCCACCAAACCCCCAAGAGAACGTTTTGAGTCCAACCAAATCAAGGACAATGGCAACCGTTCTATGCTTAACGAAAGCGAATCATCTGAAGAGGAATCATTCCGAAATGCATCTCCAAACTCCAGCAGGAACGATGTAGAGACTGAGGACACACAGAATGGCAGTGATCGTGATGAGGGAAGCTTAAGTACAAGCGAATATGACCACAAACCATACTTGGAGTGTTCACCTGATTACAAAACCATAATTACTATCCATAACAGGAAACTGAAGGGTTCCCTGAAGGATAAATTGAGAACTGAAGGTGAAGTTAGACGCATAAGTTGGAGTGAGAATACTCTTGAAAAGGCTTCAGAATCTCATGGAGCAGACATTCTTAGATTCACACAGAAAAATATCCTCAGGGTTTACCCGAGTGCAATGCGTGTCAAATCCACAAATTTCAAGCCACATATTGGGTGGATGTATGGGGTTCAGATGGTGGCATTCAATATGCAGGGCCATGGCAAATCGCTCTGGTTGATGCAGGGGATGTTCAGGGCAAATGGAGGATGTGGTTATGTAAAGAAGCCTCAAATTCTAATGCAGAAGCATCACTGTGACAATGAGTTTGATCCTACAAAGATACAGTCAGTAAAGAAGACATTAAAGGTCAAAGTATACATGGGACATGGATGGAGCTCAGATTTCAGTCCTACACACTTTGATAAGTGCTCTCCCCCAGACTTCTTCACTAAGATCCGAATTATTGGAATGCCTGGTGATGTTGCCAAGAACAAAACAAAGGTCATCATGGACAACTGGTTTCCTGTTTGGAATGAAGAATTTGAGTTCTGTTTAAGTGTTCCAGAGCTTGCAATGCTTCTGATCCAAGTAAAGGACAAAGATCAAGGAAAGGATGACTTTGCTGGGCAGACATGTTTACCAGTGTCAGAATTGAAACATGGATTTCGCTCAGTGCCTTTATACAACAAAAAGGGAGAGAAATATAAATCTGTGAAGCTGTTGATGCGATTTCAGCTTCAATGA 1818 0.4213 MGNSMATHNKYKSFLFFIRKFKVIEPDPPQDLEEAFSKFTGGGSHMSVEQLHRFMVEHQGEEHHTLSDSEKVFERVLQERNTCQETVKVDHHREHEITLDELFRFLLHNDFNGPLKTQVHHDMGAPLSHYFIYTGHNSYLKGNQLIGDCSEVPIIEALKRGVRVIELDLWPTYNKDDIKVDHGWTFTNPVSVVKCLECIKEYAFVASQYPVIITIEDHLTTDLRAEFVELVTQIFGEVLYYPGEECCLTEFPSPESLKNRVIISTKPPRERFESNQIKDNGNRSMLNESESSEEESFRNASPNSSRNDVETEDTQNGSDRDEGSLSTSEYDHKPYLECSPDYKTIITIHNRKLKGSLKDKLRTEGEVRRISWSENTLEKASESHGADILRFTQKNILRVYPSAMRVKSTNFKPHIGWMYGVQMVAFNMQGHGKSLWLMQGMFRANGGCGYVKKPQILMQKHHCDNEFDPTKIQSVKKTLKVKVYMGHGWSSDFSPTHFDKCSPPDFFTKIRIIGMPGDVAKNKTKVIMDNWFPVWNEEFEFCLSVPELAMLLIQVKDKDQGKDDFAGQTCLPVSELKHGFRSVPLYNKKGEKYKSVKLLMRFQLQ 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02335 605 MobiDBLite consensus disorder prediction 296 311 - -
Viun8g02335 605 Pfam C2 domain 478 579 IPR000008 -
Viun8g02335 605 SMART plcx_3 121 266 IPR000909 -
Viun8g02335 605 SUPERFAMILY PLC-like phosphodiesterases 121 459 IPR017946 GO:0006629|GO:0008081
Viun8g02335 605 ProSiteProfiles C2 domain profile. 459 587 IPR000008 -
Viun8g02335 605 Gene3D Phosphatidylinositol (PI) phosphodiesterase 118 471 IPR017946 GO:0006629|GO:0008081
Viun8g02335 605 ProSiteProfiles Phosphatidylinositol-specific phospholipase Y-box domain profile. 371 457 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Viun8g02335 605 SMART plcy_3 342 458 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Viun8g02335 605 SUPERFAMILY EF-hand 11 123 IPR011992 -
Viun8g02335 605 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 478 603 IPR035892 -
Viun8g02335 605 MobiDBLite consensus disorder prediction 312 332 - -
Viun8g02335 605 Pfam Phosphatidylinositol-specific phospholipase C, X domain 123 266 IPR000909 -
Viun8g02335 605 MobiDBLite consensus disorder prediction 268 332 - -
Viun8g02335 605 FunFam Phosphoinositide phospholipase C 473 605 - -
Viun8g02335 605 PRINTS Phospholipase C signature 571 581 IPR001192 GO:0035556
Viun8g02335 605 PRINTS Phospholipase C signature 126 144 IPR001192 GO:0035556
Viun8g02335 605 PRINTS Phospholipase C signature 396 417 IPR001192 GO:0035556
Viun8g02335 605 PRINTS Phospholipase C signature 152 172 IPR001192 GO:0035556
Viun8g02335 605 PRINTS Phospholipase C signature 250 267 IPR001192 GO:0035556
Viun8g02335 605 PRINTS Phospholipase C signature 417 435 IPR001192 GO:0035556
Viun8g02335 605 CDD C2_PLC_like 476 605 - -
Viun8g02335 605 Gene3D C2 domain 473 605 IPR035892 -
Viun8g02335 605 PANTHER PHOSPHOINOSITIDE-SPECIFIC PHOSPHOLIPASE C FAMILY PROTEIN 10 604 IPR001192 GO:0035556
Viun8g02335 605 SMART C2_3c 478 585 IPR000008 -
Viun8g02335 605 Gene3D - 28 113 - -
Viun8g02335 605 Pfam Phosphatidylinositol-specific phospholipase C, Y domain 367 455 IPR001711 GO:0004435|GO:0006629|GO:0007165|GO:0035556
Viun8g02335 605 ProSiteProfiles Phosphatidylinositol-specific phospholipase X-box domain profile. 121 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02335 Viun-Chr8 33292254 33295776 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02335 3 602 Acyl Lipid Metabolism Gene Families AT2G40116 52.419 0.0 622
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02335 K05857 - gmx:100820253 1046.96
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun1g03214 1 40015228 40022020 Viun8g02335 8 33292254 33295776 ECH
Viun8g02335 8 33292254 33295776 Viun8g02335 8 33292254 33295776 ECH
Viun1g03214 1 40015228 40022020 Viun8g02335 8 33292254 33295776 PCT