Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02179 ATGGGGAACACCATAGGAAGGAGTAGAAAGGCGAAGGTGATGAAGGTGGATGGAGAAACGTTGAAGTTCAAAACTCCGGCAAGAGCGAACGACGTCGTCAAGGACTACCCCGGCCACGTTCTGTTGGACTCCGAAGCGGTCAAACATTTTGGGCTTCGGGCCAAGCCGCTTGAGCCTCACCACGAATTGAAGCCCAGGAAAATCTACTTCCTCGTTGAGTTACCCAAGATTCAACCCGAAGACGATAAATCGACGCTGCATAGGAGGGTGCGATCCAGTGGTATCCGCGGCATGAACGCTAAGGATAGACTCGAGCTCTTGATGCTCTCCAAACGCTCCGTGTCGGATCTCGCCCTCGTCAGGCCCAACCCCAATCTGGGCTCTGATGGGCCCATGAGGGTTAAGATGAGACTCCCCAAGGCCCAGTTGGACAGGCTCATGGAAGAGAGCACCGACGGGTCCGACGTGGCGGAGAAAATCATAAGTTTGTACATGGGAAACAATGCCGGCGAGGCCGCCGGCAGTGCAGCGGTAGAGGACGGTGGCGCCAGGACGCTGCACCATCACACTCACAAACCACGTGGGAAACGGGTGAGTTTTAGCCCCGTGGAAAATGAAGAAATTCGCGTGGAAGCACCTTCTCAATAG 648 0.5525 MGNTIGRSRKAKVMKVDGETLKFKTPARANDVVKDYPGHVLLDSEAVKHFGLRAKPLEPHHELKPRKIYFLVELPKIQPEDDKSTLHRRVRSSGIRGMNAKDRLELLMLSKRSVSDLALVRPNPNLGSDGPMRVKMRLPKAQLDRLMEESTDGSDVAEKIISLYMGNNAGEAAGSAAVEDGGARTLHHHTHKPRGKRVSFSPVENEEIRVEAPSQ 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02179 215 PANTHER PLASTID MOVEMENT IMPAIRED PROTEIN-RELATED 1 202 - -
Viun8g02179 215 Pfam PADRE domain 1 188 IPR025322 -
Viun8g02179 215 MobiDBLite consensus disorder prediction 181 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02179 Viun-Chr8 32018881 32021135 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02179 - - vra:106763161 392.504
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02179 8 32018881 32021135 Viun8g02179 8 32018881 32021135 ECH
Viun1g03074 1 39089403 39092824 Viun8g02179 8 32018881 32021135 ECH
Viun8g02179 8 32018881 32021135 Viun1g03074 1 39089403 39092824 ECH
Viun1g03074 1 39089403 39092824 Viun8g02179 8 32018881 32021135 PCT