Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02091 ATGGCGTTCCAGAAGATCACCGTCGCCAATCCCATCGTCGAGATGGATGGAGATGAAATGACTAGGGTTATCTGGAAATCAATCAAGGACAAGCTCATTTTGCCTTTCTTGGAGTTGGACATAAAGTATTATGACCTTGGTCTTCCATACCGTGATCAGACCGATGATAAAGTTACAATTGAAAGCGCAGAAGCTACTCTCAAATACAACGTAGCAATCAAATGTGCAACTATCACTCCAGATGAAGCTCGTGTGAAGGAGTTTGGCCTGAAGAATATGTGGAAGAGTCCAAATGGGACAATTAGGAACATTTTGAATGGAACTGTCTTCAGAGAACCAATTCTTTGCAAAAACATTCCGCGCCTTGTTCCTGGTTGGACAAAGCCAATATGCATCGGAAGACATGCGTTTGGTGACCAATATCGGGCTACTGACACAGTAATTAAAGGAGCTGGAAAGCTGAAGCTGGTTTTTGTTCCAGAAGGCAAAGGTGAGAAGACTGAATTAGAGGTTTTTGACTTTACTGGTCAGGGAGGTGTTTCATTGGCTATGTACAATACTGATGAGTCTATTCGTTCTTTTGCCGAGGCTTCTATGGCAACTGCTTTAGAGAAAAAGTGGCCACTTTATCTTAGCACCAAAAATACAATTCTTAAGAAATATGATGGAAGATTCAAGGACATATTTCAGGAAGTTTACAAGGCAAGCTGGAAATCAAAGTTTGAGGCTGCTGGTATATGGTATGAGCATCGGCTCATTGATGATATGGTGGCTTATGCTCTTAAGAGTGAAGGAGGTTATGTATGGGCATGCAAAAACTATGATGGTGATGTGCAGAGTGATTTCTTAGCTCAAGGTTTTGGATCATTGGGTTTGATGACATCTGTATTGGTTTGCCCTGACGGAAAGACTATTGAAGCAGAAGCAGCCCATGGAACAGTTACCCGTCATTTTAGGGTTCATCAGAAAGGAGGCGAAACCAGCACAAATAGCATAGCATCCATCTTTGCCTGGACAAGAGGGCTAGCTCACAGGGCAAAACTGGATGACAATGCTAAACTATTGGATTTCACTGAAAAGCTAGAGGCATCTTGCATTGGAGTTGTTGAGGCTGGGAAGATGACCAAGGACTTGGCACTTATTATTCATGGATCCAAGCTTTCAAGAGAGCACTATTTGAACACGGAGGAGTTCATCGATGCCGTGGCAGCCGATCTTAGAAAGAAGCTTTCTGCATAG 1239 0.4286 MAFQKITVANPIVEMDGDEMTRVIWKSIKDKLILPFLELDIKYYDLGLPYRDQTDDKVTIESAEATLKYNVAIKCATITPDEARVKEFGLKNMWKSPNGTIRNILNGTVFREPILCKNIPRLVPGWTKPICIGRHAFGDQYRATDTVIKGAGKLKLVFVPEGKGEKTELEVFDFTGQGGVSLAMYNTDESIRSFAEASMATALEKKWPLYLSTKNTILKKYDGRFKDIFQEVYKASWKSKFEAAGIWYEHRLIDDMVAYALKSEGGYVWACKNYDGDVQSDFLAQGFGSLGLMTSVLVCPDGKTIEAEAAHGTVTRHFRVHQKGGETSTNSIASIFAWTRGLAHRAKLDDNAKLLDFTEKLEASCIGVVEAGKMTKDLALIIHGSKLSREHYLNTEEFIDAVAADLRKKLSA 412
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02091 412 ProSitePatterns Isocitrate and isopropylmalate dehydrogenases signature. 273 292 IPR019818 GO:0000287|GO:0016616|GO:0051287
Viun8g02091 412 PIRSF IDH_NADP 1 412 IPR004790 GO:0004450|GO:0006102
Viun8g02091 412 NCBIfam isocitrate dehydrogenase (NADP(+)) 4 411 IPR004790 GO:0004450|GO:0006102
Viun8g02091 412 SUPERFAMILY Isocitrate/Isopropylmalate dehydrogenase-like 3 410 - -
Viun8g02091 412 PANTHER NADP-SPECIFIC ISOCITRATE DEHYDROGENASE 4 411 IPR004790 GO:0004450|GO:0006102
Viun8g02091 412 Gene3D Isopropylmalate Dehydrogenase 3 412 - -
Viun8g02091 412 SMART Iso_dh_2 11 402 IPR024084 -
Viun8g02091 412 Pfam Isocitrate/isopropylmalate dehydrogenase 7 402 IPR024084 -
Viun8g02091 412 FunFam Isocitrate dehydrogenase [NADP] 3 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02091 Viun-Chr8 31333870 31338649 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02091 K00031 - gmx:100791166 804.283
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02091 8 31333870 31338649 Viun8g02091 8 31333870 31338649 ECH