Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g02060 ATGGAACAACTCAAGCCAAGCGCAGCTAACTCTTCTCCTCTCACACCGCTGGGTTTCTTGGACAGAGCCGCCACCGTTTACGGCGACGTCCCTTCCATTGTCTACAACCACACAACCTTCACCTGGGCCCAAACCCACCGCCGATGCCTCCAGCTCGCCTCCGCCATCTCCTCCCTCGGAATCCGCCGCGGCAGCGTCGTCTCCGTCGTCGCTCCCAACATCCCCGCCATGTACGAGCTCCAGTTTTCCATCCCCTTCGCCGGCGCTGTCCTCAACAACATCAACATCCGCCTCGACGCCCGCACCATCTCCGTCATCCTCCGCCATGCGAACTCCGCGCTCGTCTTCGTCGACTGTGCCTCACGCGACCTCGTCCTCGAAGCCTTGTCCCTCTTCCCTAAACACCACACTCAACGCCCACTCCTGGTTCTCATCGCCGACGACAGTGTCGAAAACGCAGACGTCTCACGCACCGCTGATTTCGTTGACACATACGAGGGCCTGGTGAGTAAGGGCGATCCGAACTTCGAATGGGTACGGCCCAAATCAGAGTGGGACCCGATGATACTTAACTACACCTCAGGAACGACGTCGTCTCCGAAAGGGGTTGTTCACTCCCACAGAGGAATATTCATAGTCTCCGTCGACACGCTCGTCGACTGGGCGGTTCCAAAGTGCCCGATTTATCTCTGGACGCTCCCGATATTCCACGCCAACGGGTGGACCCTCCCGTGGGGAATCGCAGCCTCGGGCGGCACCAACATCTGCGTCCGCAAGTTCGACGCGGGGATTATATACTCTCTCATAAAACGCCACCACGTCACACACATGTGCGGCGCGCCGGTGGTGCTCAGCATGTTGACAAACTCCCCGGACAACAAACCGTTGGAGAGGCCGGTTCATATACTCACCGCGGGAGCACCGCCGCCAGCGGCGGTGCTCCACCGAACGGAGGCACTTGGGTTTGTTGTGAGCCACGGGTACGGATTGACGGAAACCGCGGGGTTGGTGGTGTCGTGCGCGTGGAAGGAGAAGTGGAACCGGCTGCCGGCGGCTGAGCGGGCGAGGTTGAAGGCGCGGCAGGGGGTGAGGACGGTGGGGATGGCGGAGGTTGACGTGGTGGGTCCGACTGGGGAGAGCGTGAAGCGCGACGGAGTGAGCGTGGGGGAGATTGTGATGAGAGGAGGGTGCGTGATGTTGGGATACCTTAAAGACCCCGAAGGAAGCGCGAGTTGTTTTAAAAATGGGTGGTTCTACACGGGGGACGTCGGGGTGATGCACGAGGACGGGTACTTGGAAATTAAGGACAGGTCAAAGGATGTGATCATCAGCGGCGGCGAGAACCTGAGCAGCGTGGAGGTGGAGTCGATTTTGTACGGGCATCCGGCTGTGGTGGAGGCGGCGGTGGTGGCGCGACCGCATGAGTATTGGGGAGAGACGCCGTGCGCGTTCGTGAGCTTGAAGGCGGGGTTGAAAGAGAAACCCAGTGAAGAGGAGATAATAAAGTACTGCAGGGAGAAGATGCCGCGTTATATGGTTCCGAAGACGGTGGTTTTCAAGGATGAACTTCCGAAGACATCGACGGGGAAGATCCAGAAGTTTCTCTTGAGACAGATTGCGAAGGAGATGGGTTCTTTCTCGCAAAGTCGAATGTGA 1656 0.5888 MEQLKPSAANSSPLTPLGFLDRAATVYGDVPSIVYNHTTFTWAQTHRRCLQLASAISSLGIRRGSVVSVVAPNIPAMYELQFSIPFAGAVLNNINIRLDARTISVILRHANSALVFVDCASRDLVLEALSLFPKHHTQRPLLVLIADDSVENADVSRTADFVDTYEGLVSKGDPNFEWVRPKSEWDPMILNYTSGTTSSPKGVVHSHRGIFIVSVDTLVDWAVPKCPIYLWTLPIFHANGWTLPWGIAASGGTNICVRKFDAGIIYSLIKRHHVTHMCGAPVVLSMLTNSPDNKPLERPVHILTAGAPPPAAVLHRTEALGFVVSHGYGLTETAGLVVSCAWKEKWNRLPAAERARLKARQGVRTVGMAEVDVVGPTGESVKRDGVSVGEIVMRGGCVMLGYLKDPEGSASCFKNGWFYTGDVGVMHEDGYLEIKDRSKDVIISGGENLSSVEVESILYGHPAVVEAAVVARPHEYWGETPCAFVSLKAGLKEKPSEEEIIKYCREKMPRYMVPKTVVFKDELPKTSTGKIQKFLLRQIAKEMGSFSQSRM 551
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g02060 551 FunFam 2,3-dihydroxybenzoate-AMP ligase 439 544 - -
Viun8g02060 551 Gene3D - 440 550 IPR045851 -
Viun8g02060 551 CDD ttLC_FACS_AEE21_like 12 537 - -
Viun8g02060 551 Pfam AMP-binding enzyme C-terminal domain 453 530 IPR025110 -
Viun8g02060 551 PANTHER ACYL-ACTIVATING ENZYME 1 546 - -
Viun8g02060 551 SUPERFAMILY Acetyl-CoA synthetase-like 11 542 - -
Viun8g02060 551 Gene3D - 2 439 IPR042099 -
Viun8g02060 551 Pfam AMP-binding enzyme 21 444 IPR000873 -
Viun8g02060 551 ProSitePatterns Putative AMP-binding domain signature. 190 201 IPR020845 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g02060 Viun-Chr8 31115405 31117363 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g02060 1 543 EF-hand Containing Proteins AT1G21540 63.406 0.0 727
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g02060 - - gmx:100779857 957.592
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g02060 8 31115405 31117363 Viun8g02060 8 31115405 31117363 ECH