Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01674 ATGGGAACCGCTTGGAGAAGAGCCTTTTGCACTACCCACCCAGAATCCACACTACACTCCAAAAGCACCACCCACAGCCCCTCTCCTTCTCCCGGAACCTGCGCCAGATTCAACTTCCTCTCCTCGCCGTCATTGCACCACCACCCTCCCTCTTCCCCTCTCTCCCTCTTCAAAAACACCTTCAAATTCAGAAGTAATTGCGGAATCTGTTCGAATAGCGTGAAGACGGGACAGGGAACTGCCATTTACACTGCAGAGTGCGGTCACGCGTTTCATTTCCCTTGCGTTCTTTCCCATGCACGCTCCCACGTCTGCCCCGTCTGTCATGCCACGTGGAACGACGTTCCGCTCCACCAAAACGACGCCGTCCTTCCCACCGTTCGAACCCCAAACCACAAACAACTCGATCCTCTTTCCTCCAAATCGCTACCTTCCTACGACGACGACGAGCCTCTACCTTCTTCTCTCACGTGCTTCACGCAAATCCTTCCAATTCCTGAAGCCGATGAAAGCACGCACCAGGATGAAGAAGAAAACGACGATGTACCAGACTTCCCTGGCTTTTCTGTCCTTCCGAAACCTCAATCCTCGTTGCGACACTACGCTGAGACAAAAACTGTACGAGTCAAGCTCATGCAGGAGTGCGCGGTCATATCAGTTTCGCAAAGCTTCGAAACTCGTGCTTTGGTTTTACGAGTCAAGGCTCCGGCACCGTCGCCGCCGTTGCGACGACGGCAGGCGATGGATCTCGTGGCGGTGCTTGACGTTGGCAACGGTATGAACGGGGCAAAGCTTCACGTGTTAAAGCGCGTGATGCGACTGGTGATATCCTCTCTCGGGGCGGCTGACCGGCTTGCCGTCGTGGCTTCGTCGGCTGATTCGGAGCGGTTGTTACCTCTGCGCAGAATGACGGCTCAGGGACAACGCACGGCTCGGCGCGTGGTGGATCAGGTCGAGGTCGTGTGTGGCCAAGGATCAGGTCGTGAAGAAGTGCTTAAGAAAGCGGGGAAGGTTCTCGAAGATCGCAGAGAGAAAAATCCTCTAGCGAGGATTTTGCATCTATCTAACGGTAATGACAACTGCAAGAACAGTAATCAACGGAGATGCTTGAACTACGTGTCCTCTCTCGGGTTCGATTGTGTTGAAGTTCCGGTTTATTCGTTTGGGTTCGACATAAAAAAGACCGGTTTAACACCCGAACCGTTTGAGGATGATTTTATCGAATACATTAACAGAACATTGAGTTTGGCGGTGCAGGATTTAAGAATTCAGCTTGGCTTCTCTGCGCCGGCTGAAATTCGAGCCGTTTATTCATGCAGCGGAGGACCCACCGCGCTAAGCGTAAACTCAACCCGGCTTGGTGATTTATACGGCGAAGAAGAGAAGGAGTTGTTGGTGGAGGTCAGAGTGCCAACGTCAGCATTAGGAAACCATCACGTGTTGACAGTGCGGTGTTTCAGCAAAGACCCAGCGTCTCAAAAATTCGTGCACAGTGCAGAACACCCATTTACGGTGGTGCCGCCGAAGAGTTCTTCTCCCTGCGGCGGCAGGGTTGAGCGGCTGAGGAACGTGTTTATAACGAACCGAGCCGTAGCCGAGTCAAGGAGGATGGTGAAACATAATGAGTTTTCGAGCGCTCATCATTTGCTTGCTTCGGCTCGCGCGCTTCTAGTGCAGTTCGGCTCCGCTGAGGAGTACGTGCGCGGCTTGGACGCGGAGCTTGTAGAGCTTCAGTGGAGAAGACAGCACCGGGAGACGGTGGGGACGGGGCGGAGTGGAGAGAGCGAGAGGGAGGTAAGGTTGGTGGATGACGGAGGCGAAATGTTGACGCCGACATCGGCTTGGAGAGCCGCTGAGAAGCTGGCTAAAATGGCTAGGATGAAGAAATCGTTGAACAAAGTTAGCGACTTGCACGGCTTCGAGAATGCTAGGTTTTAA 1938 0.5351 MGTAWRRAFCTTHPESTLHSKSTTHSPSPSPGTCARFNFLSSPSLHHHPPSSPLSLFKNTFKFRSNCGICSNSVKTGQGTAIYTAECGHAFHFPCVLSHARSHVCPVCHATWNDVPLHQNDAVLPTVRTPNHKQLDPLSSKSLPSYDDDEPLPSSLTCFTQILPIPEADESTHQDEEENDDVPDFPGFSVLPKPQSSLRHYAETKTVRVKLMQECAVISVSQSFETRALVLRVKAPAPSPPLRRRQAMDLVAVLDVGNGMNGAKLHVLKRVMRLVISSLGAADRLAVVASSADSERLLPLRRMTAQGQRTARRVVDQVEVVCGQGSGREEVLKKAGKVLEDRREKNPLARILHLSNGNDNCKNSNQRRCLNYVSSLGFDCVEVPVYSFGFDIKKTGLTPEPFEDDFIEYINRTLSLAVQDLRIQLGFSAPAEIRAVYSCSGGPTALSVNSTRLGDLYGEEEKELLVEVRVPTSALGNHHVLTVRCFSKDPASQKFVHSAEHPFTVVPPKSSSPCGGRVERLRNVFITNRAVAESRRMVKHNEFSSAHHLLASARALLVQFGSAEEYVRGLDAELVELQWRRQHRETVGTGRSGESEREVRLVDDGGEMLTPTSAWRAAEKLAKMARMKKSLNKVSDLHGFENARF 645
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01674 645 Pfam von Willebrand factor type A domain 250 357 IPR002035 -
Viun8g01674 645 Pfam RING-like zinc finger 66 96 IPR001841 -
Viun8g01674 645 SMART ring_2 67 108 IPR001841 -
Viun8g01674 645 Gene3D von Willebrand factor, type A domain 248 399 IPR036465 -
Viun8g01674 645 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 54 140 IPR013083 -
Viun8g01674 645 ProSiteProfiles Zinc finger RING-type profile. 67 109 IPR001841 -
Viun8g01674 645 PANTHER CALCIUM-ACTIVATED CHLORIDE CHANNEL REGULATOR 65 640 - -
Viun8g01674 645 SMART VWA_4 247 414 IPR002035 -
Viun8g01674 645 SUPERFAMILY vWA-like 248 389 IPR036465 -
Viun8g01674 645 MobiDBLite consensus disorder prediction 128 150 - -
Viun8g01674 645 ProSiteProfiles VWFA domain profile. 249 390 IPR002035 -
Viun8g01674 645 SUPERFAMILY RING/U-box 60 124 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01674 Viun-Chr8 27721893 27724288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01674 - - gmx:100795015 841.262
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01674 8 27721893 27724288 Viun8g01674 8 27721893 27724288 ECH