Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01642 ATGGAAGCTGTTCCGGATCAAGACACTAGTATATGCACTCACTGTGATCGGGCTGTCCCTGTTGCAAATATTGACTTGCATTATGCTCATTGCTCTCGGAAACTTGAAAAATGCAAAATCTGTGGTGATATGGTTCCCAGAAAAAATGTGGAGGATCATTATTTAAACACACATGCACCGGTTTCTTGTTCATTATGCAATGAGACAATGGAGCGTGATATTTTAGATATCCATAAAGGTGAAAATTGCCCTCAAAGGATTGTCACTTGTGAGTTCTGTGAGTTTCCATTGCCAGCAATTGATCTGGCCGAGCATCAGGAAGTATGTGGGAATCGAACAGAACTTTGTCACATTTGTAACAAATATGTTAGACTTCGTGAAAGATTCAGCCATGAAGCCCGGTGCAATGGCATTATCCAAGATACTTCTGTGGGCTCTTCAAGGAATGTGAGGGAAACCGAGGGAGATCAAGGAGCTAGAAGAAGGCCGCAGAATGACTTCTCAACTAAACGCCTTCTTTTCACTATAGCCATCACCGGTATTGCTGTCATACTGGGATCTTTTTTTCTACAGAGGAAGGCAGAGCCCAGTGATGTGCATTAG 603 0.4279 MEAVPDQDTSICTHCDRAVPVANIDLHYAHCSRKLEKCKICGDMVPRKNVEDHYLNTHAPVSCSLCNETMERDILDIHKGENCPQRIVTCEFCEFPLPAIDLAEHQEVCGNRTELCHICNKYVRLRERFSHEARCNGIIQDTSVGSSRNVRETEGDQGARRRPQNDFSTKRLLFTIAITGIAVILGSFFLQRKAEPSDVH 200
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01642 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 59 114 IPR013083 -
Viun8g01642 200 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 6 58 IPR013083 -
Viun8g01642 200 PANTHER TRAF-TYPE ZINC FINGER PROTEIN-RELATED 6 194 - -
Viun8g01642 200 SUPERFAMILY TRAF domain-like 12 63 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01642 Viun-Chr8 27379774 27387273 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01642 - - gmx:100811867 388.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01642 8 27379774 27387273 Viun8g01642 8 27379774 27387273 ECH