Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01596 ATGTCGGGTGGCGGAAACCTTAGCCGCGTGTTGGTGTCTGTTGACGGAAGCGAGGAAAGCATGAAGGCACTGCGTTGGGCTCTCACCAACCTCAAGCTCCGATCTCCTACTTCCGACTCCACCGATGCTCCTTCTTTCATCATCTTCCACGTCCAATCTCCGCCCTCCATCGCCACTGGCCTCAATCCCGGTGCCATCCCCTTCGGTGGCCCCAGTGATATTGAAGTTCCAGCTTTCACAGCAGCCATTGAAGCACACCAGGAGCGCATCACCCGCGCCGTTCTCGATCACGCCCTCGGAATTTGCTCCGAGTTCAACCTCACCAGTCAGGTCAGAACTCATGTGGTAGTTGGAGATCCAAAGGAGAAGATTTGTGAAGCTGTTCAGGATTTGCATGCTGATGTTCTTGTGATGGGATCTCGTGCATTTGGCCCCATTAAGAGGATGTTCCTCGGGAGTGTGAGCAATTACTGTGCCCACCATGCTTCATGTCCTGTCATTATTATCAAGGAAACCGACAGTGTCAATAAGATAAACTGA 540 0.5241 MSGGGNLSRVLVSVDGSEESMKALRWALTNLKLRSPTSDSTDAPSFIIFHVQSPPSIATGLNPGAIPFGGPSDIEVPAFTAAIEAHQERITRAVLDHALGICSEFNLTSQVRTHVVVGDPKEKICEAVQDLHADVLVMGSRAFGPIKRMFLGSVSNYCAHHASCPVIIIKETDSVNKIN 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01596 179 CDD USP_Like 9 169 - -
Viun8g01596 179 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASES-LIKE SUPERFAMILY PROTEIN 9 170 - -
Viun8g01596 179 PRINTS Universal stress protein signature 7 25 IPR006015 -
Viun8g01596 179 PRINTS Universal stress protein signature 148 170 IPR006015 -
Viun8g01596 179 PRINTS Universal stress protein signature 130 142 IPR006015 -
Viun8g01596 179 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 9 173 - -
Viun8g01596 179 Gene3D HUPs 3 177 IPR014729 -
Viun8g01596 179 Pfam Universal stress protein family 107 170 IPR006016 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01596 Viun-Chr8 26714089 26719466 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01596 - - vra:106763910 338.961
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01596 8 26714089 26719466 Viun8g01596 8 26714089 26719466 ECH