Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01569 ATGAGAAGGTTCATGCGTTTAATGCCGTATCGGCGCCATTTGCTTTCGTCTGCGGCCTCAGAATCGCTCATGGACAAAGGAGAATCGTCATTCAGCAAATTCTTGTCGACTGGCCAATCGTTTTTACTGGCTCGGGCTTTGGTCAGTTGCGGTTTCGTCACGAAAACAGAGGAGTCTCTGATTCCGAGAATACCGTTTAGATATCGTTATTTCCATGCGACAGCATTGTCTTCTTCAGCTGACCGAGACTACTACCGAGTTCTTGGTGTTCCTGAAAATGCCAGTCAGGACGAGATAAAGAAGGCATTTCACTTGCTCGCCAAAAAGTACCATCCAGATGCAAACAAGAACAATCCATCTGCTAAGAGGAAATTTCAAGACATAAGAGAAGCTTATGAGATATTGAGAGACTCTAAAAAGAGAGCACAGTATGACGAGATGCGTACTCGTGGTTCAGAAGATACAGAATATAATCATGGTGATGCAGAAAGGTTTAGAAATGCTTATCGTTCTCATTTTTCGGATTCATTTCATAAAGTATTCTCTGAGATATTTGAAGAAGCAACTACTCAATTCTCATCAAACATAGAGGTGGAGTTGTCTCTTACTTTCTCAGAAGCAGCAAGAGGATGCACCAAACACGTGTCATTTGATGCATACGTTCCCTGCGATTATTGCAATGGGCAGGGCCATCCTCTTGATGCCGTTCCAATAGTTTGTCCAACATGTAGGGGCTTAGGTCGAGTTACAATCCCCCCATTTACATCAACATGCATAACCTGTAAAGGATCAGGCCGAATCGCTAAGGACTTTTGTATATCATGTAGAGGATCTGGGGTGGTTGAAGGGATTAAAGAGGTTAAAGTTACTATACCAGCAGGTGTGGATTCGGGAGATACAATCCATGTGCCAGAAGGTGGGAATGCTGCTGGAAGTGTAGGCCGACCTGGAAGTTTATACATTAAAATAAAGGTGGCAGAGGATTCAATCTTTACCAGAAATGGTGCGGATATCTACGTGGAGTCTAATATTAGCTTTACACAGGCTATTCTTGGTGGCGAAGTTGAGGTGCCTACTTTATCCGGGAAGACGCAATTAAAAATACCCAAGGGTGTTCAACATGGACAGCTTCTGGTATTAAGAGGCAAAGGACTTCCAAAGCATGGATTTCTTGTACATCATGGGGATCAATATGTACGGTTTCGTGTTAACCTTCCAATTGCAATCAATGAACGACAACGTGCTATACTTGAAGAACTTGCGAAGGAAGAAATAAATGAGGGAAACAGCTCTTCATTTGGGGGAAATTGGCTTTACCAGCAGCTATCTACTGGTTGA 1338 0.4305 MRRFMRLMPYRRHLLSSAASESLMDKGESSFSKFLSTGQSFLLARALVSCGFVTKTEESLIPRIPFRYRYFHATALSSSADRDYYRVLGVPENASQDEIKKAFHLLAKKYHPDANKNNPSAKRKFQDIREAYEILRDSKKRAQYDEMRTRGSEDTEYNHGDAERFRNAYRSHFSDSFHKVFSEIFEEATTQFSSNIEVELSLTFSEAARGCTKHVSFDAYVPCDYCNGQGHPLDAVPIVCPTCRGLGRVTIPPFTSTCITCKGSGRIAKDFCISCRGSGVVEGIKEVKVTIPAGVDSGDTIHVPEGGNAAGSVGRPGSLYIKIKVAEDSIFTRNGADIYVESNISFTQAILGGEVEVPTLSGKTQLKIPKGVQHGQLLVLRGKGLPKHGFLVHHGDQYVRFRVNLPIAINERQRAILEELAKEEINEGNSSSFGGNWLYQQLSTG 445
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01569 445 CDD DnaJ_C 194 406 - -
Viun8g01569 445 Gene3D - 254 287 - -
Viun8g01569 445 SMART dnaj_3 82 140 IPR001623 -
Viun8g01569 445 SUPERFAMILY HSP40/DnaJ peptide-binding domain 331 417 IPR008971 GO:0006457|GO:0051082
Viun8g01569 445 Pfam DnaJ domain 83 145 IPR001623 -
Viun8g01569 445 Hamap Chaperone protein DnaJ [dnaJ]. 80 445 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Viun8g01569 445 PRINTS DnaJ domain signature 120 140 IPR001623 -
Viun8g01569 445 PRINTS DnaJ domain signature 140 159 IPR001623 -
Viun8g01569 445 PRINTS DnaJ domain signature 85 103 IPR001623 -
Viun8g01569 445 PRINTS DnaJ domain signature 103 118 IPR001623 -
Viun8g01569 445 Gene3D - 219 252 - -
Viun8g01569 445 CDD DnaJ_zf 223 279 IPR001305 GO:0031072|GO:0051082
Viun8g01569 445 Pfam DnaJ central domain 223 279 IPR001305 GO:0031072|GO:0051082
Viun8g01569 445 ProSitePatterns Nt-dnaJ domain signature. 125 144 IPR018253 -
Viun8g01569 445 Gene3D - 194 324 - -
Viun8g01569 445 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 39 427 - -
Viun8g01569 445 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 210 281 IPR036410 -
Viun8g01569 445 SUPERFAMILY Chaperone J-domain 79 175 IPR036869 -
Viun8g01569 445 FunFam Molecular chaperone DnaJ 326 433 - -
Viun8g01569 445 Gene3D DnaJ domain 80 193 IPR036869 -
Viun8g01569 445 ProSiteProfiles Zinc finger CR-type profile. 210 284 IPR001305 GO:0031072|GO:0051082
Viun8g01569 445 SUPERFAMILY HSP40/DnaJ peptide-binding domain 194 334 IPR008971 GO:0006457|GO:0051082
Viun8g01569 445 Gene3D - 326 432 - -
Viun8g01569 445 Pfam DnaJ C terminal domain 196 406 IPR002939 -
Viun8g01569 445 CDD DnaJ 83 137 IPR001623 -
Viun8g01569 445 ProSiteProfiles dnaJ domain profile. 83 148 IPR001623 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01569 Viun-Chr8 26215741 26236828 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01569 83 178 Miscellaneous Gene Families AT1G16680 33.333 3.22e-09 57.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01569 - - gmx:100809440 796.578
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01569 8 26215741 26236828 Viun8g01569 8 26215741 26236828 ECH