Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01543 ATGGCTAATGCAGCTGACTTGATAGAACGAAGACAGCGTTCTGAATTTCAGTCTCAAGTTAAGGGCACACTTTTTAATGCCATAAAGGGAAATCCTGATATTATTCCATCCTTACTTACACTGGCTCTAAATGATGCTTTGACTTATGATAAGGCAACAAAATCGGGTGGTCCAAATGGCTCTATACGGTTCAGCTCAGAAATAAGTAGACCAGAAAATACAGGGCTTTCTCCTGCCTTAAATTTGTTAGAGGAAGTAAAAAAGGAAATAGACTCATATTCCAAAGGTGGACCCATTTCCTATGCAGATCTGATCAACTATGCAGCACAAAGTGCTGTCAAGGCCACATTTTTAGCTTCTGCCATTCGCAAATGTGGTGGAAATGAGGAGAAAGGAAATATCCTGTACAATGCATACGGATCAAGTGGGCAGTGGGGTTTGTTTGATAGGCAATTTGGTAGGGCTGATGCTCAAGACCCGGATCCAGAGGGTAGAGTTCCAATATGGGAGAAAGCAAGTGTGCAAGAAATGAAAGACAAGTTTTCTGCTGTCGGATTTGGTCCTCGCCAGCTGGCTGTTTTGTCTGCATTCTTGGGTCCTGATCAGAATGCTACTGAAACTTTACTGGCGAGTGATCCTGATGTTGCTCCATGGGTTCAGAAATACCAGAGGAGCCGTGAAACGGTCTCTCAGACAGATTATGAGGTTGATTTGATAACTACTTTCACAAAACTTAGTACCTTGGGCCAACAAATCAACTATGAGGCATATACATATCCTCGCCAAAAGATCGACATTACCAAACTCAAATTGTAA 816 0.4228 MANAADLIERRQRSEFQSQVKGTLFNAIKGNPDIIPSLLTLALNDALTYDKATKSGGPNGSIRFSSEISRPENTGLSPALNLLEEVKKEIDSYSKGGPISYADLINYAAQSAVKATFLASAIRKCGGNEEKGNILYNAYGSSGQWGLFDRQFGRADAQDPDPEGRVPIWEKASVQEMKDKFSAVGFGPRQLAVLSAFLGPDQNATETLLASDPDVAPWVQKYQRSRETVSQTDYEVDLITTFTKLSTLGQQINYEAYTYPRQKIDITKLKL 271
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01543 271 FunFam thylakoid lumenal 29 kDa protein, chloroplastic 3 171 - -
Viun8g01543 271 ProSiteProfiles Plant heme peroxidase family profile. 15 199 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g01543 271 PANTHER THYLAKOID LUMENAL 29 KDA PROTEIN, CHLOROPLASTIC-RELATED 2 261 IPR044831 GO:0004601|GO:0034599
Viun8g01543 271 Gene3D - 189 271 - -
Viun8g01543 271 Gene3D - 4 182 - -
Viun8g01543 271 PRINTS Plant ascorbate peroxidase signature 53 63 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun8g01543 271 PRINTS Plant ascorbate peroxidase signature 35 50 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun8g01543 271 PRINTS Plant ascorbate peroxidase signature 67 91 IPR002207 GO:0004601|GO:0006979|GO:0020037
Viun8g01543 271 CDD plant_peroxidase_like 20 268 - -
Viun8g01543 271 Pfam Peroxidase 21 195 IPR002016 GO:0004601|GO:0006979|GO:0020037
Viun8g01543 271 SUPERFAMILY Heme-dependent peroxidases 6 249 IPR010255 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01543 Viun-Chr8 25669739 25675120 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01543 K00434 - gmx:100795192 498.819
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01543 8 25669739 25675120 Viun8g01543 8 25669739 25675120 ECH