Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01538 ATGGAAAGAAGCAAAATTCAAATGCTTTATGATGCTTCTCATGCCCTGTTCTCTCAATCGGAGCTTCCAACTTTTCAACAAATCCATTATGTTAAAAATTTGCTAGATAAGATTGAAGCTATAGATGTGGGAATCGACCAGTTTGGATTGTGTGATTCTCCTGTGTCAGATGCAAGCAGTGATAGCAGCAAGGGATTGCTTTGTGGACAAGGCTTTTCTGAGATTACATACATTCACATTCATGAATGTGACAATTTCTCTATGGGTGTGTTCTGTCTTCCAGCAGGAAAAGTATTTCCTCTTCATGATCACCCAGAAATGACAGTGTTGAGTAAGCTCTTGTATGGTTCTGCATATGTTAAAGCTTATGACTGGATTGCATTGGATTGTTCTGGAACCCAAACTGTAGGATTGGGTGGGAAGGTAGTGGATGAAGTGATGAAAGCACCACATGAGCCATCGATATTGTTTCCAAGAAGTGGTGGCAATATTCATTCTTTCACAGCGTTGACGCCTTGTGCAATACTTGATGTGCTTTCTCCACCCTACTCTGAAGACTTTGGAAGGCCTTCCACTTACTTTTCAGATTTTCCTATTCCTTCTCTTAATGGTTATGCTATACTTGAGGAGAGACCCGTGCCTAGTGACCTAGTTGTTCAAGGAGCATCATATCTTGGACCTCCAATTGTAACAATGACCGAATACAAATTTTGA 714 0.4062 MERSKIQMLYDASHALFSQSELPTFQQIHYVKNLLDKIEAIDVGIDQFGLCDSPVSDASSDSSKGLLCGQGFSEITYIHIHECDNFSMGVFCLPAGKVFPLHDHPEMTVLSKLLYGSAYVKAYDWIALDCSGTQTVGLGGKVVDEVMKAPHEPSILFPRSGGNIHSFTALTPCAILDVLSPPYSEDFGRPSTYFSDFPIPSLNGYAILEERPVPSDLVVQGASYLGPPIVTMTEYKF 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01538 237 SUPERFAMILY RmlC-like cupins 3 194 IPR011051 -
Viun8g01538 237 Pfam PCO_ADO 34 229 IPR012864 GO:0016702
Viun8g01538 237 CDD cupin_ADO 84 184 - -
Viun8g01538 237 Gene3D Jelly Rolls 57 197 IPR014710 -
Viun8g01538 237 PANTHER UNCHARACTERIZED 6 229 IPR012864 GO:0016702
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01538 Viun-Chr8 25606232 25607722 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01538 K23953 - gmx:100811165 422.55
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01538 8 25606232 25607722 Viun8g01538 8 25606232 25607722 ECH