Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01535 ATGGCAATCTCCTCAACTTCCAACTCTCTCATTCCCACCAAATCTCTCATCCCCCAATCCAACCCTCTCCTTCCATCCACCAACATCAGGCCTGCCCTCAAGCCCAGGCCCGGCCCATCTCCTTCCATCTTTGCCGTCCACGCGGCTGAGCCCGCCAAAAACCCCGTGGTCTCCGACAAGCCCAAGCCCCAGTCCCCGCCTGCCCCGGCCCCGTCCCGGGCCGGAAAATGGGCTGTGGACAGCTGGAAGGCGAAGAAGGCCCTGCAGCTGCCCGAGTACCCGAGCAAGGAGGATCTGGAGTCCGTTCTCCACACGCTCGAGGCGTTTCCGCCAATCGTCTTCGCCGGCGAGGCACGGACGCTGGAGGAGCGCCTGGGCGAAGCTGCTCTCGGAAATGCCTTCCTACTCCAAGGCGGTGACTGCGCCGAAAGCTTCAAGGAGTTCAATGCCAACAACATCCGTGACACCTTCCGAATCCTCCTCCAGATGAGCGTCGTCATGATGTTCGGCGGCCAAATGCCCGTCATCAAGGTGGGGAGAATGGCTGGGCAGTTTGCGAAGCCGAGATCGGATTCGTTTGAGGAGAAGAACGGCGTGAAGCTTCCGAGTTACAGAGGAGATAATATTAACGGAGATGCGTTTGATGAGAAGTCAAGGATTCCGGATCCGCAGAGGATGATCAGGGCTTATTGTCAAGCTGCAGCTACGCTTAATCTTCTCAGAGCTTTCGCCACTGGAGGTTATGCCGCTATGCAGAGGGTTACTCAGTGGAATTTGGACTTCACCGAGCACAGTGAACAGGGAGATAGGTACCGTGAGCTTGCTAACCGAGTTGATGAGGCCCTTGGATTCATGGCTGCTGCTGGGCTCACAGTGGATCATCCAATCATGAAAACAACCGAATTCTGGACATCTCATGAGTGCTTATTGTTGCCATATGAACAATCCCTCACTAGGTTGGATTCAACTTCTGGTCTCTACTATGATTGCTCAGCCCATATGCTTTGGGTTGGAGAACGAACCAGACAGCTCGATGGTGCTCATGTTGAGTTTCTAAGAGGAGTTGCTAACCCCTTGGGAATTAAGGTAAGTGATAAGATGGATCCAAATGAGCTTGTGAAACTCATTGAGATCTTGAATCCCCAAAACAAACCAGGGAGAATAACTGTGATCACTAGGATGGGAGCTGAAAATATGAGGGTGAAGCTTCCACATCTCATCAGGGCAGTGCGCAGGGCAGGACAAATTGTCACTTGGGTCAGTGATCCTATGCACGGAAACACCATTAAGGCTCCCTGTGGTCTTAAAACTCGCCCCTTCGATTCCATCAGGGCTGAAGTGAGAGCATTCTTCGATGTGCACGAGCAAGAAGGAAGCCACGCAGGAGGGGTTCATCTAGAGATGACGGGTCAAAATGTGACTGAGTGCATTGGTGGATCAAGAACAGTTACATTTGATGATTTGAGCTCACGTTACCACACACACTGTGACCCAAGGCTCAATGCTTCACAATCGCTTGAGCTTGCTTTCATCATCGCTGAGCGTTTGAGAAAGAGCAGGATGAGATCGGAGCAAGCAAGTTCCCCTCTAGGACTGTAA 1599 0.526 MAISSTSNSLIPTKSLIPQSNPLLPSTNIRPALKPRPGPSPSIFAVHAAEPAKNPVVSDKPKPQSPPAPAPSRAGKWAVDSWKAKKALQLPEYPSKEDLESVLHTLEAFPPIVFAGEARTLEERLGEAALGNAFLLQGGDCAESFKEFNANNIRDTFRILLQMSVVMMFGGQMPVIKVGRMAGQFAKPRSDSFEEKNGVKLPSYRGDNINGDAFDEKSRIPDPQRMIRAYCQAAATLNLLRAFATGGYAAMQRVTQWNLDFTEHSEQGDRYRELANRVDEALGFMAAAGLTVDHPIMKTTEFWTSHECLLLPYEQSLTRLDSTSGLYYDCSAHMLWVGERTRQLDGAHVEFLRGVANPLGIKVSDKMDPNELVKLIEILNPQNKPGRITVITRMGAENMRVKLPHLIRAVRRAGQIVTWVSDPMHGNTIKAPCGLKTRPFDSIRAEVRAFFDVHEQEGSHAGGVHLEMTGQNVTECIGGSRTVTFDDLSSRYHTHCDPRLNASQSLELAFIIAERLRKSRMRSEQASSPLGL 532
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01535 532 Gene3D Aldolase class I 260 518 IPR013785 -
Viun8g01535 532 MobiDBLite consensus disorder prediction 1 27 - -
Viun8g01535 532 SUPERFAMILY Aldolase 70 517 - -
Viun8g01535 532 MobiDBLite consensus disorder prediction 1 76 - -
Viun8g01535 532 Pfam Class-II DAHP synthetase family 77 513 IPR002480 GO:0003849|GO:0009073
Viun8g01535 532 NCBIfam 3-deoxy-7-phosphoheptulonate synthase class II 77 519 IPR002480 GO:0003849|GO:0009073
Viun8g01535 532 FunFam Phospho-2-dehydro-3-deoxyheptonate aldolase 266 518 - -
Viun8g01535 532 PANTHER PHOSPHO-2-DEHYDRO-3-DEOXYHEPTONATE ALDOLASE 1, 2 42 526 IPR002480 GO:0003849|GO:0009073
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01535 Viun-Chr8 25550845 25555281 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01535 K01626 - gmx:100797019 994.186
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01535 8 25550845 25555281 Viun8g01535 8 25550845 25555281 ECH
Viun8g01535 8 25550845 25555281 Viun9g02591 9 35015359 35019460 PCT