Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01483 ATGCAGAAGAAGCTAGCATTCCCAGTCTCCAAGAGCCTGGACCAATTCAAATCGTTGTACGGTTCCATTTCGGGAGCTTCCAAGCCATTACCTTCGCGTCCTTCTGTGGATACCGTTTCATCGGGGAGTTTTGCAAACCTGAAGCTCACAGCAGAGAAATTGGTGAAAGAGCAAGCTTCGGCGAAGACTGATCTTGAAAATGCGAATGCTAAGCTTAAGAAGTCGCAGGAGTGTTTGCGTGCATTGGAAGAAAAATTGCAGAATGCTTTAAACGAAAATGCCAAGCTCAAGGTCAAGCAGAAGGAAGATGAGAAATTGTGGAAGGGATTGGAGTCTAAGTTCTCTTCTACTAAGACTTTATGTGATCAGCTTACGGAGACTTTACATAAGTTGGCTGGTCTAGTTCAGGATGCCGAAAAAGATAAGGAGACATTGGAAAATAAACTGTCAGCAAGTTCAGAAGCTCTTGATAGCTTGAGTAAACAGATGGATGATTTGTCTTTGAAGCTAGATTCTGCACAGGAAACAATTAGAACCCGTGATAACGAGCTAGAGAAGCTTAAAGTTGCTTCAGAAGAAAAGGAGAAATTTCACAGGGATGAACATTGCAGAGTTGCCAATGTTATAGAAGAGAAAGATAACATGATAAGGAATTTAGAAGAAATGTTAACATCTAGTAGATTGGCTACAGAGAGTTTGAACTCAACTTTGGAAGAGGTCCATCTTCAGTTAAAAGTTAAACAAGATGAAATTTTGCGTCACATAACCAGTCAAGAGAAATTGGAGAAAGAAAAGAGTGATCTTCAATTGTTGAATGCTGGGCTTGCAGAAAAGCATGACATGTCACTTCACGTAATTGAAAACCTTAAAGAAACACTTCAGTCTTTGGCTGGAGATTTGTCAAATTTAGACAAAGAAAGCCTGAATCTTTTGAGCAAGTTCGATGAAATGAATTCACTCTATGCTTCTTGCTTCCAGTTGGTTCAGAAGGAGAGAGAAACTTTCTCAAAACATGCTCAATTCCAGTATAGTGAGCTTAATAATAAATTTGTAGTCTTGGAATTAGAAAAGAACGCAACTCAAATGAAAAGTTACGAGTTAAGCAAAACTGTGGATGAACTTCAGAAAGTTCAAGAATCTACTGTAGCCCAATTTACAGAGGACTCTCGAGTAGCTGCAGAGAGAATTCAAAGTTTGGTGTCAGAAACTGAGACTTTAATCTCAAAAAAGAAAGAAGCAGAGGTATTAATTTCCAAATTAGAAGAGAAAGTTGAACTTCTATTAGAAAGTTCTAGATCATCAGACAACCACGTGCAAGACTTGCTGCTGAAGGTTTCAGCATTAGAGACTGAAAGCAAAGAAAATACCGAAAGACTGCAGGCAGAGATATTGAAGAAATCAGAGGAAATAGATACTTCGCAAAAGGAGAGAATAAAGCTAGAGAAGCATGCTGATTCTCTTGATCAAGAATTAATCCAGCTTCGTAATGCCCTGGAGGAAAAAGAACAGTGTGTTTTACATTGTAAGGAGCAGGAAAAGAAGCTACAAGATCAAATCACAGAGAACATATCATTGTTGACTGCTGTTGAAAGCAAACTTTCAGAAGCTAGAAAGCAATATGATCAAATGGTAGAGAATAAACAGTTAGAACTATCAAGGCATTTGAAAGAAATATCTCAGAGAAATGATCAGGCTATCAATGACATTAAGAGGAAGTATGAATTGGAGAAGATGGAAATTGTGAATATGGAAAAAGACAAGACAGACAACACTATTGCCGAAATTGAGGAAAGATGTGATAAAAAACTTGCAGAATGCAACGAGGAATCAAGGCAACAGTTGATGCGCATTCAGGAAGAACACACGTTGTTGGTTAATCAAATGCAGCAGGAGCATGACAAGAAGCAACTAAGCCTCATAGCTGAACACAATGAACAGCTAAAGCGTGCCCAACTGCAAGCTGAAAATGAACTGCGAGAGAAAACAATCTTTATGAGGAATGATCATGAAGCTCAAATTAAAGCATTGAGATGTGAACTTGAAGATGAATGTCGTAAGCTGGAAGAGGAGCTGCATGTTCAAAAATCCAAAGAAGACAGACAAAGGGCTTTGTTGCAGTTGCAGTGGAAAGTGATGAGTGACAAACCCAAAGAGGACCAAGAAGTGAATTCAAAACAGGATTACTCCATTTCATCAATTAAGAGAAGGAGTTCTTGTGGAGGCAAAAGCAATCTGCAGCGTGATGTAGACTCTCCTTACTTTGAAGCAACACAAACACCAGTGCCAAAGTTGTTGACAAAAGTGGACAATATTAAAACAGGAAGTGCGGTGAGCATTCCTAAGCGTCATAGAAAGGTAACTCGCCATGAATATGAAGTTGAGACTTCTAATGGAAGAACAATCACAAAGAAAAGGAAAACAAGAAGTACTGTTATGTTTGAGGATCCTAGAAATCGAAAGATAAATACACCAAAAGTAAATACTCCTGGAAGTGTTGTTAAGAGCATCAAAGGAGGAGGACATACTAATCCTTCAAATATAGGTGATTTGTTTTCAGAAGGGTCTCTTAATCCCTATGCTGATGATCCCTATGCATTTGATTAG 2604 0.3863 MQKKLAFPVSKSLDQFKSLYGSISGASKPLPSRPSVDTVSSGSFANLKLTAEKLVKEQASAKTDLENANAKLKKSQECLRALEEKLQNALNENAKLKVKQKEDEKLWKGLESKFSSTKTLCDQLTETLHKLAGLVQDAEKDKETLENKLSASSEALDSLSKQMDDLSLKLDSAQETIRTRDNELEKLKVASEEKEKFHRDEHCRVANVIEEKDNMIRNLEEMLTSSRLATESLNSTLEEVHLQLKVKQDEILRHITSQEKLEKEKSDLQLLNAGLAEKHDMSLHVIENLKETLQSLAGDLSNLDKESLNLLSKFDEMNSLYASCFQLVQKERETFSKHAQFQYSELNNKFVVLELEKNATQMKSYELSKTVDELQKVQESTVAQFTEDSRVAAERIQSLVSETETLISKKKEAEVLISKLEEKVELLLESSRSSDNHVQDLLLKVSALETESKENTERLQAEILKKSEEIDTSQKERIKLEKHADSLDQELIQLRNALEEKEQCVLHCKEQEKKLQDQITENISLLTAVESKLSEARKQYDQMVENKQLELSRHLKEISQRNDQAINDIKRKYELEKMEIVNMEKDKTDNTIAEIEERCDKKLAECNEESRQQLMRIQEEHTLLVNQMQQEHDKKQLSLIAEHNEQLKRAQLQAENELREKTIFMRNDHEAQIKALRCELEDECRKLEEELHVQKSKEDRQRALLQLQWKVMSDKPKEDQEVNSKQDYSISSIKRRSSCGGKSNLQRDVDSPYFEATQTPVPKLLTKVDNIKTGSAVSIPKRHRKVTRHEYEVETSNGRTITKKRKTRSTVMFEDPRNRKINTPKVNTPGSVVKSIKGGGHTNPSNIGDLFSEGSLNPYADDPYAFD 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01483 867 Coils Coil 258 278 - -
Viun8g01483 867 Coils Coil 121 190 - -
Viun8g01483 867 Coils Coil 286 306 - -
Viun8g01483 867 Coils Coil 640 660 - -
Viun8g01483 867 MobiDBLite consensus disorder prediction 818 867 - -
Viun8g01483 867 Coils Coil 456 504 - -
Viun8g01483 867 PANTHER SYNAPTONEMAL COMPLEX PROTEIN-RELATED 26 732 - -
Viun8g01483 867 SUPERFAMILY Tropomyosin 78 268 - -
Viun8g01483 867 MobiDBLite consensus disorder prediction 714 745 - -
Viun8g01483 867 MobiDBLite consensus disorder prediction 838 852 - -
Viun8g01483 867 MobiDBLite consensus disorder prediction 725 745 - -
Viun8g01483 867 Coils Coil 666 686 - -
Viun8g01483 867 Coils Coil 526 546 - -
Viun8g01483 867 Coils Coil 403 430 - -
Viun8g01483 867 Coils Coil 566 627 - -
Viun8g01483 867 Coils Coil 51 106 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01483 Viun-Chr8 24516276 24536163 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01483 - - gmx:100788684 1387.47
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01483 8 24516276 24536163 Viun8g01483 8 24516276 24536163 ECH