Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01475 ATGTGGCGTAGGGAAGTCAGAAAACAGGTGCCTCATTCTGTTCCCGCTGCTGCCGATGACTGTGAGCAGCTCCGAAAAGCCTTCGCAGGTTGGGGGACAAACGAAGGGCTGATCATATCCATCTTGTCTCATAGAAATGATAGTCAGAAGAAGCTTATCCGAGAAACTTATGCCAAGACCTTCGGAGAAGATCTCCTCAAGGTCTTGGACAAAGAACTCACCAGCGATTTTGAGAGGCTGGTTCATCTTTGGACACTTGATTCTGCTGAACGTGATGCTTTTTTGGCAAATGAGGCAGCTAAAAAGTGGACTTCAAGCAATCGGGTTCTGGTAGAAATAGCCTGCGCTAGGTCCTCCGAACAATTGTTGGCTGCGAGGAGGGCGTACCATGCTCTTTATAAGAAGTCCATTGAGGAGGATGTTGCACTTCGCACAACCGGGGACTTCCGTAAGCTCCTAGTACTTCTTGTTAGTTCTTATAGATATGAAGGAACTGAGGTCGACTTGAACTTGGCAAAAATTGAGGCAAAATTGCTGCATGACAAGATTTCAAAAAAGGCTTATAACGATGACGACCTAATCAGGATTTTCGCTACAAGGAGCAGAGCACAGACTAATGCTACTTTTAATCATTACAAAGATGAATTTGGAAAAGATATCAACAAGGACCTGAAGGCTGATCCAAAGAATGAATTCCTGACTTTACTAAGAGCAACTTCGAAGTGCTTGATCCATCCTGAGAAGTACTTTGCGAAGGTTCTCCGTTTGGCTATCAACGGGCGAGGGACCCTTGAAGAAGACCTTACAAGAGTGGTGGTCACGAGAGCGGAAGTTGATTTGAAAACGATTGGAGATGAGTATCAAAGGAGGAACAGTGTCCCTCTTGATCGTGCCATTGCCAAGGACACCAGTGGTGACTATGAGAAAATGCTTTTGGAGCTTTTAGGACACGAGGATGCTAAATAG 966 0.4524 MWRREVRKQVPHSVPAAADDCEQLRKAFAGWGTNEGLIISILSHRNDSQKKLIRETYAKTFGEDLLKVLDKELTSDFERLVHLWTLDSAERDAFLANEAAKKWTSSNRVLVEIACARSSEQLLAARRAYHALYKKSIEEDVALRTTGDFRKLLVLLVSSYRYEGTEVDLNLAKIEAKLLHDKISKKAYNDDDLIRIFATRSRAQTNATFNHYKDEFGKDINKDLKADPKNEFLTLLRATSKCLIHPEKYFAKVLRLAINGRGTLEEDLTRVVVTRAEVDLKTIGDEYQRRNSVPLDRAIAKDTSGDYEKMLLELLGHEDAK 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01475 321 FunFam Annexin 170 244 - -
Viun8g01475 321 PRINTS Annexin family signature 302 315 IPR001464 GO:0005509|GO:0005544
Viun8g01475 321 PRINTS Annexin family signature 69 85 IPR001464 GO:0005509|GO:0005544
Viun8g01475 321 PRINTS Annexin family signature 258 278 IPR001464 GO:0005509|GO:0005544
Viun8g01475 321 PRINTS Annexin family signature 29 51 IPR001464 GO:0005509|GO:0005544
Viun8g01475 321 PRINTS Annexin family signature 96 117 IPR001464 GO:0005509|GO:0005544
Viun8g01475 321 SUPERFAMILY Annexin 10 319 IPR037104 GO:0005509|GO:0005544
Viun8g01475 321 FunFam Annexin 245 317 - -
Viun8g01475 321 Pfam Annexin 249 314 IPR018502 GO:0005509|GO:0005544
Viun8g01475 321 Pfam Annexin 20 82 IPR018502 GO:0005509|GO:0005544
Viun8g01475 321 Pfam Annexin 176 237 IPR018502 GO:0005509|GO:0005544
Viun8g01475 321 Pfam Annexin 92 156 IPR018502 GO:0005509|GO:0005544
Viun8g01475 321 SMART annex3 104 156 IPR018502 GO:0005509|GO:0005544
Viun8g01475 321 SMART annex3 32 84 IPR018502 GO:0005509|GO:0005544
Viun8g01475 321 SMART annex3 262 314 IPR018502 GO:0005509|GO:0005544
Viun8g01475 321 SMART annex3 187 239 IPR018502 GO:0005509|GO:0005544
Viun8g01475 321 ProSiteProfiles Annexin repeat profile. 170 241 IPR018502 GO:0005509|GO:0005544
Viun8g01475 321 PANTHER ANNEXIN 10 314 - -
Viun8g01475 321 FunFam Annexin 87 157 - -
Viun8g01475 321 Gene3D Annexin 87 157 IPR037104 GO:0005509|GO:0005544
Viun8g01475 321 ProSiteProfiles Annexin repeat profile. 15 86 IPR018502 GO:0005509|GO:0005544
Viun8g01475 321 ProSitePatterns Annexin repeat signature. 262 314 IPR018252 GO:0005509|GO:0005544
Viun8g01475 321 PRINTS Plant annexin signature 230 248 IPR009118 -
Viun8g01475 321 PRINTS Plant annexin signature 165 185 IPR009118 -
Viun8g01475 321 PRINTS Plant annexin signature 123 137 IPR009118 -
Viun8g01475 321 Gene3D Annexin 245 320 IPR037104 GO:0005509|GO:0005544
Viun8g01475 321 ProSiteProfiles Annexin repeat profile. 87 158 IPR018502 GO:0005509|GO:0005544
Viun8g01475 321 Gene3D Annexin 169 244 IPR037104 GO:0005509|GO:0005544
Viun8g01475 321 FunFam Annexin 8 86 - -
Viun8g01475 321 Gene3D Annexin 3 86 IPR037104 GO:0005509|GO:0005544
Viun8g01475 321 ProSiteProfiles Annexin repeat profile. 245 316 IPR018502 GO:0005509|GO:0005544
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01475 Viun-Chr8 24192946 24195688 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01475 K17098 - gmx:100784252 501.516
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01475 8 24192946 24195688 Viun8g01475 8 24192946 24195688 ECH