Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01459 ATGGCTCTCCCTCCCTCTTCACTTCCCACTACATTCTTCATCATCTCTTTCCTTCTACCCACTCTCCTCCTCGCCGAGTCAACTCAGCCTCCTCACTCCTGCGACTCCTCCTCCAACTCACCCTACTACGCATTCTGCAACACCAAGCTCCCCATCCCCCAGAGAGCAAAAGACCTGGTCTCGCGACTTACCCTCGACGAGAAACTCGCCCAACTCGTTAACTCAGCACCCGCGATTCCCCGACTCGGCATCCCCAAATACCAGTGGTGGAGTGAAGCCCTGCACGGCGTCGCCGACGCAGGCCTCGGCATCCGATTCAATGGCACCATCAAATCCGCCACCAGCTTCCCTCAAGTCATTCTCACTGCGGCTTCCTTCGATCAAAACCTCTGGTACAATATCAGCAAGGCGATTGGCCGGGAAGCTAGGGCGGTGTACAATGCGGGGCAAGCGTTGGGGATGACGTTTTGGGCTCCGAACATTAACGTTTTCAGGGATCCACGGTGGGGGAGGGGGCAAGAGACGGTGGGAGAAGACCCATTGATGAATGCAAAGTATAGTGTGGCTTACGTGAGAGGGCTTCAAGGGGATTCCTTTGAAGGAGGGAAACTTGGGGAGAGGCTTCAAGCTTCTGCGTGCTGCAAGCACTTCACAGCCTATGATGTTGACCAATGGAAAGGCCTCGATCGCTTTGTCTTCGATGCCCAGGTCTCAAAGCAAGATTTGGCAGACACATACCAACCTCCATTCCAGAGTTGCATTGAGCAAGGTCGAGCCAGTGGCATAATGTGTGCTTACAACCGTGTCAATGGGGTTCCAAACTGTGCAGATTTTAATCTCTTAACCAAAACTGCAAGACAACAATGGAAATTTGATGGATATATTACGTCAGATTGTGGAGCAGTCTCTATCATACACGAGAAACAAGGTTATGCAAAAACAGCAGAAGATGCTATAGCCGATGTCTTTAGAGCAGGGATGGATGTGGAGTGTGGTGATTACATAACTAAGCATGCAAAATCTGCCGTTTCTCAGAAAAAGTTAACGATATCTCAAATAGACCATGCTCTTCAGAACCTATTCTCCATAAGAATGAGGCTAGGCCTATTTGATGGGAACCCCACGAAGCTTCCCTATGGCACCATTGGTCCCAACGAAGTGTGTTCCAAAGAACACCTCCAACTGGCTCTTGAAGCAGCAAGAGATGGCATAGTCCTTCTGAAGAACACTGACTCACTTCTCCCACTTCCAAAAACAAGCCACAGTGTTGCTGTGATTGGCCCAAATGCCAATGCATCGTCACTAGTTTCCCTAGGAAACTACTACGGTCGTCCTTGCAAATTGGTGACCCTTTTGCAAGGCTTTGAAGGCTATGCTAAGGACACCACTTACCACCCTGGGTGTGATGATGGCCCACAGTGTGCCTCTGCAAGGATAGAAGAGGCAGTGGAGGTTGCAAGAAAGGTAGATTATGTGGTGCTTGTTATGGGGTTGGATCAGAGTCAAGAGAGGGAGTCACATGACAGAGAGTATCTAGGTTTACCAGGGAAGCAAGAAGAGTTGATCAAGAGTGTGGCTGAGGCTTCTAAGAGGCCAATTGTTCTGGTGCTGTTGTGTGGAGGGCCAGTGGATATCACTTCAGCAAAGTTTGATAAAAAAGTTGGAGGAATCTTGTGGGCAGGGTACCCTGGGGAACTTGGAGGAGTGGCCCTGGCTCAGGTTATCTTTGGTGATCATAACCCAGGTGGTAAACTACCAATTACTTGGTACCCTAAGGATTTCATCAGAATACCAATGACAGATATGAGGATGAGAGCTGATTCAGCCTCAGGTTACCCAGGGAGAACCTACAGATTTTACACTGGCCCAAAGGTCTATGAATTTGGCTATGGCCTAAGCTACACAAAATATTCCTACCATCTCCTCTCTCTCTCACACAACACCCTCCACATCAACCAATCCTCCACCCATTTGACGACTGAAAATTCTGAAACCATCCGTTACAAACTGGTTTCAGACTTGGGAGAACAAACATGCGAATCCATGTCATTGTCAATCACTTTGGGGGTCACGAATCACGGTAACATGGCAGGGAAGCATCCCGTGTTGTTGTTTTTGAAGAAGGGACAAGTGAGAAACGGGAATCCAGTGAAACAATTGGTGGGGTTTCAAAGTGTGAAGTTAAATGCTGGTGAAACTGCTCAAGTGGGATTTGAGCTAAGCCCTTGTGAGCATCTTAGCGTGGCAAACGAGGCTGGTTCATTGGTGATTGAAGAAGGGTCTTATTTGTTGCTTGTGGGGGACCAAGAGTACCCATTAAAAGTCACGGTTTGA 2334 0.4867 MALPPSSLPTTFFIISFLLPTLLLAESTQPPHSCDSSSNSPYYAFCNTKLPIPQRAKDLVSRLTLDEKLAQLVNSAPAIPRLGIPKYQWWSEALHGVADAGLGIRFNGTIKSATSFPQVILTAASFDQNLWYNISKAIGREARAVYNAGQALGMTFWAPNINVFRDPRWGRGQETVGEDPLMNAKYSVAYVRGLQGDSFEGGKLGERLQASACCKHFTAYDVDQWKGLDRFVFDAQVSKQDLADTYQPPFQSCIEQGRASGIMCAYNRVNGVPNCADFNLLTKTARQQWKFDGYITSDCGAVSIIHEKQGYAKTAEDAIADVFRAGMDVECGDYITKHAKSAVSQKKLTISQIDHALQNLFSIRMRLGLFDGNPTKLPYGTIGPNEVCSKEHLQLALEAARDGIVLLKNTDSLLPLPKTSHSVAVIGPNANASSLVSLGNYYGRPCKLVTLLQGFEGYAKDTTYHPGCDDGPQCASARIEEAVEVARKVDYVVLVMGLDQSQERESHDREYLGLPGKQEELIKSVAEASKRPIVLVLLCGGPVDITSAKFDKKVGGILWAGYPGELGGVALAQVIFGDHNPGGKLPITWYPKDFIRIPMTDMRMRADSASGYPGRTYRFYTGPKVYEFGYGLSYTKYSYHLLSLSHNTLHINQSSTHLTTENSETIRYKLVSDLGEQTCESMSLSITLGVTNHGNMAGKHPVLLFLKKGQVRNGNPVKQLVGFQSVKLNAGETAQVGFELSPCEHLSVANEAGSLVIEEGSYLLLVGDQEYPLKVTV 777
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01459 777 Gene3D - 55 377 IPR036962 GO:0004553|GO:0005975
Viun8g01459 777 Pfam Glycosyl hydrolase family 3 C-terminal domain 404 634 IPR002772 GO:0004553|GO:0005975
Viun8g01459 777 PANTHER SUGAR HYDROLASE-RELATED 21 773 IPR044993 GO:0009044|GO:0045493
Viun8g01459 777 Pfam Glycosyl hydrolase family 3 N terminal domain 109 361 IPR001764 GO:0004553|GO:0005975
Viun8g01459 777 FunFam probable beta-D-xylosidase 2 389 635 - -
Viun8g01459 777 SUPERFAMILY Beta-D-glucan exohydrolase, C-terminal domain 404 637 IPR036881 GO:0004553|GO:0005975
Viun8g01459 777 Gene3D - 389 634 IPR036881 GO:0004553|GO:0005975
Viun8g01459 777 SUPERFAMILY (Trans)glycosidases 43 403 IPR017853 -
Viun8g01459 777 Pfam Fibronectin type III-like domain 702 769 IPR026891 -
Viun8g01459 777 Gene3D Immunoglobulins 635 777 IPR013783 -
Viun8g01459 777 PRINTS Glycosyl hydrolase family 3 signature 284 302 IPR001764 GO:0004553|GO:0005975
Viun8g01459 777 PRINTS Glycosyl hydrolase family 3 signature 116 135 IPR001764 GO:0004553|GO:0005975
Viun8g01459 777 PRINTS Glycosyl hydrolase family 3 signature 210 226 IPR001764 GO:0004553|GO:0005975
Viun8g01459 777 SMART Fn3_like_2 700 770 IPR026891 -
Viun8g01459 777 FunFam probable beta-D-xylosidase 7 55 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01459 Viun-Chr8 23789842 23794564 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01459 26 777 Glycoside Hydrolase AT1G78060 64.201 0.0 1011
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01459 - - gmx:100780688 1408.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01459 8 23789842 23794564 Viun8g01459 8 23789842 23794564 ECH
Viun8g01459 8 23789842 23794564 Viun9g02549 9 34556881 34561312 PCT