LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Viun8g01389	ATGCATCCTTTCTGCTGTGTCTCCGTCGTCTCCGACCACTCTTCTCCGATCACCCTCGACATGCCCCCTATCCCTGCCGCACCCAGATCCGACCCCGCTCACCGGCCAGGACAAGCCCTTCACTCTGTCACCAACGGTGGCGAAAGCGGCCGCGCGCACCCCCTGCCGGTTCCGGCCGTGGTGGATGTCAGGATCAAAGACCTTGTGGGGAACGGAATCTCCGGGATTCTGCACAAGTGGGTGAACTATGGCAAAGGATGGAGAACGCGCTGGTTCGTGCTTCAAGACGGTGTCCTCTCCTACTACAAGATTCATGGACCCGACAAGATCATCGTAAACTCCGAAACCGAGAAGGGATCGAAGGTCATTGGCGAGGAATCTGCGCGACTGATCTCTCGTAACCGCAATTCGAATCACGTCGATCGTCGCAGAAAGCCCATTGGCGAAATCCATCTTAAGGTTTCGACTATTCGTGAGAGCAGGTCCGATGACAAGCGATTCTCTGTCTTCACTGGGACTAAGAGACTCCATTTGAGGGCAGAGACTTCTGATGATCGGGTGGCGTGGATGGAGGCCTTGCAGACAGTGAAAGATATGTTTCCCCGGATATCAAACAGTGATTTAATGGCTCCAGTGGACAATGTGGCTGTTTCGACTGAGAAACTGAGGCTTCGGCTTATGGAGGAAGGAGTGAGTGAGGAAGCCATCCGGGACAGTGAACAGATAATGAAAAATGAGTATGCTGCGCTCCAAAACCAGCTTCTGCTGCTTAAACAAAAACAGGTGGCTCTAATCGACACTTTGCGGCAATTAGAGACAGAAAAGGTTGATCTGGAGAATACTGTGGTTGACGAAAGCCAAAGACAGGTTAATGATCAAGAGGTTTCCTCTGGATTAGGGCAGGAAAAATCTAGTGAAAGTGGAACTGAGTCGGAGGATGACAATGAGAGAAATGATGCAGCTGAGGAAGAAACAGATGATGAAGATACTGCCTTTTTTGACACTCGGGATTTTCTGTCATCGTCGAATTCTTTTAAAAGTAATGCTTCTGATATTAGAGTCTCCTCTTTCTCTTCTGACGATGAAGGACTCTATGCTGTTGAATCAGAGGAGGATATAGATCCTTCCATTAAATCTGTTGGATTCAACTATCCTTACGTTAAGCGACGAAAGAAATTACCTGATCCTGTTGAAAAGGAGAAAGGTGTCAGTCTTTGGTCAATGATTAAGGATAATATTGGGAAGGATCTAACAAAAGTTTGCCTTCCTGTTTATTTTAATGAGCCTCTCTCCTCTTTGCAAAAATGCTGTGAAGAAATGGAATACTCATATCTTCTAGACCGAGCATATGAATGGGGAAGAAGGGGTAATAGCCTCATGAGAATTCTCAATGTTGCTGCTTTTGCTGTATCTGCCTATGCTTCGACTGAAGGAAGAATCTGTAAACCATTTAACCCATTACTAGGGGAAACATATGAGGCTGACTTTCCGGATAAAGGCTTTCGATTTTTCTCAGAGAAGGTCAGTCATCACCCAATGATAGTTGCATGTCACTGTGAGGGTACAGGTTGGAAATTTTGGGGAGATAGCAACTTAAAGAGTAAATTTTGGGGTCGGTCAATTCAGCTTGATCCTGTTGGCATTTTGACTTTGGAATTTGATGATGGTGAAGTATTCCAGTGGAGTAAGGTTACTACATCAATATACAATCTCATATTGGGAAAGCTGTATTGTGATCATTACGGTACAATGCGGATACAGGGAAATCAAGATTACTCATGTAAACTGAAATTCAAGGAACAGTCTATAATTGATCGAAACCCTCACCAGGTTCATGGTATTGTTCAGGACAGAAATGGGAAAATATTGTCTACTTTGCTCGGAAAATGGGATGACAGCATGTATTATATAAATGGAGACTATAGTGGGAAGGGAAAAGGTTATGAATCAATGTCAGATGCCCATTTAATATGGAAGCGGAGCAAGCCACCCAAGTTCCCCACTAGATATAGCTTCACTCGGTTTGCCATCACATTAAATGAACTCACCCCTGGATTAAAGGATAAGCTGCCACCAACTGATTCCAGGTTAAGACCTGACCAAAGGCATTTGGAAAATGGCGAGTATGAGATGGCAAATTCAGAAAAATTGCGACTTGAACAGCGTCAACGTCAGGCTCGGAAAATGCAAGAGAGCGGTTGGGAACCACGGTGGTTTTGTAAGGATAAAGAGAGCGGTTCCTACCGCTACTTGGGAGGGTATTGGGAGGCTCGAGAACAAGGAAATTGGAACTCATGTCCTGACATTTTTGGTCAAATTCCTTCTGATCATCATCTCTTAGACGAAGGTTAA	2352	0.4515	MHPFCCVSVVSDHSSPITLDMPPIPAAPRSDPAHRPGQALHSVTNGGESGRAHPLPVPAVVDVRIKDLVGNGISGILHKWVNYGKGWRTRWFVLQDGVLSYYKIHGPDKIIVNSETEKGSKVIGEESARLISRNRNSNHVDRRRKPIGEIHLKVSTIRESRSDDKRFSVFTGTKRLHLRAETSDDRVAWMEALQTVKDMFPRISNSDLMAPVDNVAVSTEKLRLRLMEEGVSEEAIRDSEQIMKNEYAALQNQLLLLKQKQVALIDTLRQLETEKVDLENTVVDESQRQVNDQEVSSGLGQEKSSESGTESEDDNERNDAAEEETDDEDTAFFDTRDFLSSSNSFKSNASDIRVSSFSSDDEGLYAVESEEDIDPSIKSVGFNYPYVKRRKKLPDPVEKEKGVSLWSMIKDNIGKDLTKVCLPVYFNEPLSSLQKCCEEMEYSYLLDRAYEWGRRGNSLMRILNVAAFAVSAYASTEGRICKPFNPLLGETYEADFPDKGFRFFSEKVSHHPMIVACHCEGTGWKFWGDSNLKSKFWGRSIQLDPVGILTLEFDDGEVFQWSKVTTSIYNLILGKLYCDHYGTMRIQGNQDYSCKLKFKEQSIIDRNPHQVHGIVQDRNGKILSTLLGKWDDSMYYINGDYSGKGKGYESMSDAHLIWKRSKPPKFPTRYSFTRFAITLNELTPGLKDKLPPTDSRLRPDQRHLENGEYEMANSEKLRLEQRQRQARKMQESGWEPRWFCKDKESGSYRYLGGYWEAREQGNWNSCPDIFGQIPSDHHLLDEG	783

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Viun8g01389	783	PANTHER	OXYSTEROL-BINDING PROTEIN-RELATED	72	758	IPR000648	GO:0008289
	Viun8g01389	783	Coils	Coil	709	729	-	-
	Viun8g01389	783	Pfam	Oxysterol-binding protein	404	759	IPR000648	GO:0008289
	Viun8g01389	783	CDD	PH_ORP_plant	73	205	-	-
	Viun8g01389	783	FunFam	Oxysterol-binding protein-related protein 2A	701	772	-	-
	Viun8g01389	783	MobiDBLite	consensus disorder prediction	283	305	-	-
	Viun8g01389	783	MobiDBLite	consensus disorder prediction	282	333	-	-
	Viun8g01389	783	MobiDBLite	consensus disorder prediction	22	53	-	-
	Viun8g01389	783	MobiDBLite	consensus disorder prediction	312	331	-	-
	Viun8g01389	783	Coils	Coil	240	288	-	-
	Viun8g01389	783	Gene3D	-	490	664	-	-
	Viun8g01389	783	SMART	PH_update	71	200	IPR001849	-
	Viun8g01389	783	Pfam	Pleckstrin homology domain	78	194	-	-
	Viun8g01389	783	SUPERFAMILY	PH domain-like	74	202	-	-
	Viun8g01389	783	SUPERFAMILY	Oxysterol-binding protein-like	399	775	IPR037239	-
	Viun8g01389	783	FunFam	oxysterol-binding protein-related protein 1D isoform X1	490	662	-	-
	Viun8g01389	783	ProSiteProfiles	PH domain profile.	70	198	IPR001849	-
	Viun8g01389	783	Gene3D	-	701	764	-	-
	Viun8g01389	783	Gene3D	-	71	200	IPR011993	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Viun8g01389	Viun-Chr8	21704165	21711213	Dispersed/Tandem

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Viun8g01389	K20456		-	gmx:100817212	1376.69

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Viun8g01389	8	21704165	21711213	Viun8g01389	8	21704165	21711213	ECH