Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01320 ATGAGTCCCTACATTTTCGGAGTCATACTCCCTCTCCTCGTCACGCTTCTCGTACGCAACAAGAATCCTCCCAAACGACGCGGCGTTCCGGTCCAAACCAGCGGCGAGGCCGGTCTGGTCATCCGAAACAGCCGGCTCGAGTCCCCGGTCCAGAGCGCGTGGGAAGGCGTTGCCACGCTCGCGGAGCTCTTCGAAGAGGCGTGCAAAACGCATTCTGAGAGGCTCTTCCTTGGCACGCGCGTGGTGCTGGCAAGGGAACTGGAGAGCGGCCCCGACGGCAGGTCGTTCGAGAAGCTTCACTTGGGAGATTACGGCTGGCTCTCCTACGATACTGCCTTCGATGTCGTTTCCAGCTTCGCCTCCGGGTTAGCCTTCCTCGCACATGCCAGGGAGGAACGCGCCGCCATCTTCGCTGACACGCGCCAAGAGTGGTTTATGGCGCTTCAGGGTTGTTTCAGGCGAAATGTGACAGTAGTGACTATGTATGCATCATTGGGAGAGGAAGCTTTATCATATTCATTGAATGAGACAGAGGTTACAACAGTGATTTGTGGGCGAAAAGAATTGAAAACACTAGTAAATATAAGTGGACAACTTGACACAGTGAAACGTGTGATTTGTATGGATGATGATATCCCATCTGATGCCTCTTCTATTGCATATAACTGGACAATCACTTCGTTCGCTGAGGTTGAGAGACTTGGCAGAGAAAACCCTGTTGAAGCTGATTTACCACTTTCAGCAGATGTTGCAGTTATAATGTATACAAGTGGAAGTACAGGATTACCCAAGGGTGTGATGATGACACACGGCAATGTCTTAGCTACACTCTCTGCTGTGATGACCATTGTTCCTGATATTGGGACAAAGGATATATATCTTGCATACTTGCCGATGGCTCATATCTTAGAATTAGCAGCTGAGAATTTGATGGCAGCTGTTGGAGTTCCTATAGGATATGGATCTCCTTTGACCCTTACTGACACATCAAACAAGATAAAGAAAGGAACAAAGGGGGATGCTACTGCACTGAGTCCAACTCTAATGGCAGCGGTACCAGCAATTCTTGATCGTGTTCGTGATGGAGTATTCAAAAAGGTAAATGCAACAGGAGGATTGCCAAAGAAATTGTTTTATTTAGCCTATGCCCGGAGGTTGCAAGCAGTTAATGGTAGTTGGCTTGGAGCTTGGGGTTTGGAAAAGGCTCTTTGGGATTTTCTTGTGTTCAAAAAGGTCCGAGCTATTCTGGGCGGCCGTATCCGTTTTATACTATCTGGTGGTGCTCCCCTTTCTGGTGATACCCAAAAGTTCATCAACATTTGTCTTGGTGCTCCAATCGGTCAAGGATATGGTCTTACAGAGACTTGTGCTGGTGGGACATTCTCTGATGTTGATGATACTTCTGTTGGTCGTGTTGGACCACCTCTTCCATGCTCATTTATTAAGCTAATCGACTGGCCCGAAGGTGGATATTTAACAAATGACTCACCAATGCCCCGTGGAGAAATTGTAATTGGTGGTCCAAATGTCACTCTAGGGTATTTCAAAAATGAAGAGAAAACGAATGAATCATACAAGGTTGATGAAAGAGGAATGAGGTGGTTTTACACTGGTGACATTGGGAGATTTCATCCAGATGGATGCCTTGAAATCATTGACCGTAAAAAGGACATTGTTAAACTGCAGCATGGAGAATATGTCTCTTTGGGAAAGGTTGAGGCAGCTCTTATTGTTAGTCCCTTTGTGGACAATATTATGGTTCATGCTGATCCTTGCCACAGTTACTGTGTGGCACTTGTGGTGGGTTCTCAGTTCACATTGGAGGAATGGGCTTCAAAACAAGGAATTTCATATATCAATTTTTCAGATTTGTGTGCAAAAGAAGAAACTGTGAAGGAGGTGCATGCATCACTTGTAAAGGAGGGAAAGAAGGTGCATCTGGAGAAATTTGAGATTCCTGCAAAAGTTAAATTGCTTTCTGACCCATGGACCCCTGAGTCTGGCCTTGTCACTGCTGCTCTCAAACTCAAGAGGGAGGCCATAAAAAAGACTTTTAATGAGGAACTTACAAAGTTGTATGCTTCATAG 2088 0.4612 MSPYIFGVILPLLVTLLVRNKNPPKRRGVPVQTSGEAGLVIRNSRLESPVQSAWEGVATLAELFEEACKTHSERLFLGTRVVLARELESGPDGRSFEKLHLGDYGWLSYDTAFDVVSSFASGLAFLAHAREERAAIFADTRQEWFMALQGCFRRNVTVVTMYASLGEEALSYSLNETEVTTVICGRKELKTLVNISGQLDTVKRVICMDDDIPSDASSIAYNWTITSFAEVERLGRENPVEADLPLSADVAVIMYTSGSTGLPKGVMMTHGNVLATLSAVMTIVPDIGTKDIYLAYLPMAHILELAAENLMAAVGVPIGYGSPLTLTDTSNKIKKGTKGDATALSPTLMAAVPAILDRVRDGVFKKVNATGGLPKKLFYLAYARRLQAVNGSWLGAWGLEKALWDFLVFKKVRAILGGRIRFILSGGAPLSGDTQKFINICLGAPIGQGYGLTETCAGGTFSDVDDTSVGRVGPPLPCSFIKLIDWPEGGYLTNDSPMPRGEIVIGGPNVTLGYFKNEEKTNESYKVDERGMRWFYTGDIGRFHPDGCLEIIDRKKDIVKLQHGEYVSLGKVEAALIVSPFVDNIMVHADPCHSYCVALVVGSQFTLEEWASKQGISYINFSDLCAKEETVKEVHASLVKEGKKVHLEKFEIPAKVKLLSDPWTPESGLVTAALKLKREAIKKTFNEELTKLYAS 695
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01320 695 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 37 693 - -
Viun8g01320 695 ProSitePatterns Putative AMP-binding domain signature. 253 264 IPR020845 -
Viun8g01320 695 Gene3D - 49 554 IPR042099 -
Viun8g01320 695 Pfam AMP-binding enzyme 102 562 IPR000873 -
Viun8g01320 695 SUPERFAMILY Acetyl-CoA synthetase-like 56 693 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01320 Viun-Chr8 19924390 19940749 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01320 148 694 Acyl Lipid Metabolism Gene Families AT1G77590 79.525 0.0 922
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01320 K01897 - gmx:100803677 1261.13
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01320 8 19924390 19940749 Viun8g01320 8 19924390 19940749 ECH