Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01316 ATGCGCTGCATTTTTGAAGCTAATATTGGATTGTTAGACCCAATGATGGATAAGAAGAGATGGCTTTGGAAGAGGAAGTCTTCTGAGAAGAGCCCTGATGAAACTGAAAGTTCAGGATCTGTTTCTTCTCATTCCGGGAGGTATTCAGATGAACAGGAGGCACTGAAGGAATCTCCTAGTAGAAGCAATCATTCACCTGATGTCACATCAAAAGCTACTGTCTATGCCGAAGCAGTTGACTATTGTTCATTTATCAATGAACAATTGCCTGAAGAAGTCACCTCTAAAACTGTACCAGCTACTGGCATTGCAAGTGATGATTCATCAGAGAAAGACGAAAATGGAGAAAATGAAAACATAAAAGATGTAAAGGAAGATGTTCTAAATGATGGGTTGAGGAACATGTCGGAGAAGCTATCTGCTGCCCTAGTGAATGTCAACGCCAAAGAAGACTATGCCAAAGTTGCTGAAGAAGCTATTGCAGGCTGGGAAAAGGCTGAAAAAGAAGTGGCAGTTTTGAAGAAGCAACTTGACACAGCCATTCTCAGGAATTCATTTTTGGAAGATCGAGTCACTCATCTAGATGGAGCACTTAAGGAGTGTGTTAGGCAGCTAAGCCAGACGATAGAAGAGCAGGAAGAGAGTATTTATGATGCTGTTGCAAAAAAGACACAGGAATTGGAATCAGCCAAAATTAAACTTGAGAGCAAACTCACCGAGCTTCAAAAAAAATTAGATGCTTCAGAGGCCAGGTCTTCAATTGACTTTGATATGTATAGAAAGGTAGAATATTTGGAGAAAGAGAACATGACTCTCAAGCATGAGATTTTTGTTCAATCAGAAGAGCTGGAAATCAGGACAATTGAGAGGGATCTAAGCACTCAAGCTGCTGAGACAGCTAGCAAGCAGCATTTGGAAAGCATCAAGAAAGTAGCCAAGCTTGAAGCTGAATGCCGGAGATTGAGGAGTGTGGCTTCTAAAGCTTCATTAGTTAATGATCATAAATCCATTGTTCAGTCCTCATTCAGTGTTGAATCTCTAACAGATAGTCAATCAGACAGTGCAGAGCGGCATACTGCAGTGGAAATTGAAGGTCACAAGATGAATGGCTCAGAACCAAACAGGTTTGAGCCTAGTTGTTCTGACTCGTGGGCGTCTGCACTAATTGCTGAGCTTGATCAGTTCAAGAATGAAAAGTGCAGACAAACTCCATCCTGTTCTGTTAAACTTGATCTGATGGACGATTTTCTTGAAATGGAACGACTTGTTGCATTGCCTGAAACTAAGAAGGAAAGCTTGGTCCAAGAGTCAGTTGTTATCAATCAATCCATAAACAAAGAAAGCTCTCTCAGCGTAGACTTTGAGATCATGATTGAGCACATTGATGAGTTGAAAGAGAAATTAGAGAAGGTGGAAGCTGATAAAGCTGAACTACAGATAGCTTTGATGAAAAGTGAAGAAATTATTGAGGAGTCACAACTTCAGTTGAAGGAAGCAGGAGAGAAATTGGAGGAGTTGCAAAGAGAGCTAGAAAATGCCTACAACTCAAAGCAAAGGGTAGAAGATCACCTACTGGACATAGTGACTGAGGCTCAAACATTATCTGTGAAGGTTGAATTCTTAGAATCTGAGGTTGATAAGGAGAGGGCTGTCTCCGGTGAGATTGCAATGAAGTTTAGGGACTTGGAGGAAGAGTTAGAAAGAAAATCTGCAGAGGTTAACACATTAGAAGCAGAGCTTGATAAGAAGAAGGCTGTGTCAAATAAAATTGCCATGAAATGCAAGGACCTAGAGAAAGAGCTAGAAAATAAATCCGACAAGGTTGACTTGTTAGAAGCAGAGGTTGGTAAGGAAAGGGAGGAGTCAGATAAAATTGCAAAAAAGTTGAAGGGCATGGAGCAAGTGCTAGACAGCAAATCTGCAAAGGTTGACGTATTAGAAGCAGAAGTTGCTAAGCAGAAGGATGTGTCTGATAAAATTGCGAAAAAGTGTAAGGACCTGGAGGAAGTGGTAGAGAACAAATCTGCAAAGGTTGAGTTATTAGAAGCAGAAGTTGATAAAGAGAGGACTGTGTCAGATAAAATTTCATTGAGGTGTAAGGACTTGGAGGAGAAGCTAGAAAGCAAATCTGCAAAGGTTGATTTGTTAGAAGAAGAGGTTCATAAGGAGAGGACTACTTCAAAAGAAATTGCAATGAAGTGTAGGAAATTGGAGGATGAATTGCTCAGGTCAACTGCTAGCTCATATGGAGAAAAGAAGATTAAGCAGGAGGACCTAGCACTGGCTGCAGGAAAGCTTGCTGAGTGCCAGAAAACAATAGCATCTTTGGGAAATCAGTTGAAATCCCTGGCTACACTAGAAGATTTCCTTATTGACACTGCAAGCATTCCTGCAAGTCCATCACTCATTGCTCAGGCTGGTGGGGAGATGTGGAAGTTGCATTCCAATGGCACATTTTCACCTAAAAGAGATTCCATTTCTTCAAGGTTGGCTGATGGTAGCTCTTGTTCACCCTTGAACAAAAATGAGGAGACCTCACCACTTTCATCATCTTCATCAACATCATCACCAGCTATGCCAAATCATGTCAGTTCTGAGAGGAGTAGAAATGGCTTTGCAAAATTTTTCTCTAGAACCAAGAGTGGAATCCGGCTACAAATATAG 2664 0.4107 MRCIFEANIGLLDPMMDKKRWLWKRKSSEKSPDETESSGSVSSHSGRYSDEQEALKESPSRSNHSPDVTSKATVYAEAVDYCSFINEQLPEEVTSKTVPATGIASDDSSEKDENGENENIKDVKEDVLNDGLRNMSEKLSAALVNVNAKEDYAKVAEEAIAGWEKAEKEVAVLKKQLDTAILRNSFLEDRVTHLDGALKECVRQLSQTIEEQEESIYDAVAKKTQELESAKIKLESKLTELQKKLDASEARSSIDFDMYRKVEYLEKENMTLKHEIFVQSEELEIRTIERDLSTQAAETASKQHLESIKKVAKLEAECRRLRSVASKASLVNDHKSIVQSSFSVESLTDSQSDSAERHTAVEIEGHKMNGSEPNRFEPSCSDSWASALIAELDQFKNEKCRQTPSCSVKLDLMDDFLEMERLVALPETKKESLVQESVVINQSINKESSLSVDFEIMIEHIDELKEKLEKVEADKAELQIALMKSEEIIEESQLQLKEAGEKLEELQRELENAYNSKQRVEDHLLDIVTEAQTLSVKVEFLESEVDKERAVSGEIAMKFRDLEEELERKSAEVNTLEAELDKKKAVSNKIAMKCKDLEKELENKSDKVDLLEAEVGKEREESDKIAKKLKGMEQVLDSKSAKVDVLEAEVAKQKDVSDKIAKKCKDLEEVVENKSAKVELLEAEVDKERTVSDKISLRCKDLEEKLESKSAKVDLLEEEVHKERTTSKEIAMKCRKLEDELLRSTASSYGEKKIKQEDLALAAGKLAECQKTIASLGNQLKSLATLEDFLIDTASIPASPSLIAQAGGEMWKLHSNGTFSPKRDSISSRLADGSSCSPLNKNEETSPLSSSSSTSSPAMPNHVSSERSRNGFAKFFSRTKSGIRLQI 887
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01316 887 Coils Coil 664 726 - -
Viun8g01316 887 SUPERFAMILY Tropomyosin 457 629 - -
Viun8g01316 887 Coils Coil 220 251 - -
Viun8g01316 887 Coils Coil 629 649 - -
Viun8g01316 887 MobiDBLite consensus disorder prediction 106 122 - -
Viun8g01316 887 Coils Coil 454 523 - -
Viun8g01316 887 MobiDBLite consensus disorder prediction 34 48 - -
Viun8g01316 887 Pfam Filament-like plant protein, long coiled-coil 679 785 IPR008587 -
Viun8g01316 887 Pfam Filament-like plant protein, long coiled-coil 378 442 IPR008587 -
Viun8g01316 887 Pfam Filament-like plant protein, long coiled-coil 151 250 IPR008587 -
Viun8g01316 887 Pfam Filament-like plant protein, long coiled-coil 259 327 IPR008587 -
Viun8g01316 887 MobiDBLite consensus disorder prediction 23 69 - -
Viun8g01316 887 PANTHER FILAMENT-LIKE PLANT PROTEIN 4 16 571 - -
Viun8g01316 887 MobiDBLite consensus disorder prediction 93 122 - -
Viun8g01316 887 Coils Coil 559 621 - -
Viun8g01316 887 MobiDBLite consensus disorder prediction 821 870 - -
Viun8g01316 887 SUPERFAMILY Tropomyosin 573 785 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01316 Viun-Chr8 19749878 19754697 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01316 - - aprc:113847186 1278.85
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01316 8 19749878 19754697 Viun8g01316 8 19749878 19754697 ECH