Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01292 ATGGCTTCTCCTACGCATCGCACGCGCCTCGATCAGTTTTACGTGTCAAAGAAAAGGAAAGCTGCGACGCCGGTTTGTAAGGTTGGAAGATCCGAGAAAGGTGCCAGGCAAGGGGCTGACGCGTCTCCGAGTTCCAAAGGCACTTTGGACGGTTACTTGATTGCGTCGCAGGATGGTGACGGTGACAGTGCCACCGCCCCAAACACAGTTAAGAGAAATTTGGCATCAGAGATCGGTAGTTTTCATGCCAATGGACTTAATAAGCACACTGTTTTATCGGCTCAAGGGTTTGATGATTCTGAAACTAGTGGGGCGACTGAATTCGGGCAGGGTGCTGCGAATTTAGAGCTCAAACAGTTTGCAGCTGGCTTTTTGTCTTTGTATTGCAGTGAATTGCATCCAAGTGTGGATTTCCCTTCAGAGATGAAAGTGGATGATCACAAGAGTCATGGTACCGTGGCAGAGGGACATAGTTGCTTACCACAGAAGAGTAAGTGCACTGCCAGAGAGCCGGGTTTTGGTGTTGAAAATGTATCATTAAATGTCAAGATTGACGAAGACGTCAAGTCTGGTGTTGTTGGTAATAATACTATGGGATATGTTCCTATCTCTTGTTCGAAGGTTTCTGATTGTGGTGACACTGCTGCCTTTGAGACAGGCTTTAGAAAGTGTAGTAATACACCTAAAATGTCTAGGAATATGGCTGAATGCTATACACCGGGGTCTTTGATTGTTAAAGCTAGGGTTAAGGAGACTCCAAAGTCAGTACGTGGAAGCTCATCATTTTCACCTGGAGAGGCATTTTGGAATGAGGCAATTTTACTCGCTGACAGTTTGTGTGTTCCCATGGGTAATGATCCTTCTAAGGCTATGTGGGAAAGTAATGTGGTGGAAGATGGACCTGAGATGAATAACTCGTGCAATTTACAAAATTATGATGGCAAGCCAAGGAAAATATTGGATCAAAGTAAAAGCAGAATCTGGAATATGGAAGCAGGCACTTCTTTCGGGTTAGTGGGGATGCACCCAAAAGATTCTGGGAAAGAAGCATCCAGCCTTCCTGTAAAACATTTTGATTTTTCGTTTGAGGACAACAGTTTAGAAGAAAATACCATGCAAAATGGCCATGTTGGTGATCAGAGCAATGATACTTACATGGCTGGTAAACAGTATGGATCAGGTCCTACCACTAGTCATACTTATGAAGAGAAGAATGAAGTACAAGAGAAGACTTTAGTAAATAAATTAGGAAAAAGAAATTGTCATGGTAATGTTAGTATGACATCTAATTCACCCCACAATGAGGTCAGGACACCAATTAGTGCACATGAAACTGATGAAGCCAATACGCCTTCAACTAGTGTATCATTTAATGATCATTTTGACCTAAATAGCTGGCTTCCTCCTGAAATATGCAACATATATAGGAAGAAAGGAATATCGAACCTTTACAATTGGCAGGTTGATTGCCTTCGAGTGGATGGTGTCCTACAGAGAAGAAATCTTGTATATTGTGCTTCTACAAGTGCTGGTAAAAGTTTTGTTGCTGAAATTTTAATGCTGCGGAGGGTGATAACAACTGGAAAAATGGCGCTACTTGTTCTTCCATATGTATCAATTTGTGCAGAAAAGGCAGAACACCTCGAACGTCTCCTAGAGCCACTTGGTAAACATGTTCGTAGTTATTATGGAAACCAAGGTGGTGGAACACTTCCTAAAGATACTTCTGTAGCTGTCTGCACAATAGAGAAGGCGAACTCTCTAATTAATAAATTGTTGGAAGAGGGTCGTCTGTCAGAAATGGGAATTATAGTAATTGATGAACTTCACATGGTTGGTGATCCCAGAAGAGGTTATCTTCTAGAACTTATGTTGACAAAGCTTCGTTATGCAGCAGGGGAAGGTATTCCAAAGTCAAGCGATGGAGAAAGTTCAGGTGGAAGCAGTGACAAGGCTGATCCTGCACAGGGTCTGCAAATTGTAGGAATGAGTGCAACAATGCCAAATGTTGCAGCAGTTGCTGACTGGCTTCAAGCAGCACTATACCAGACAGAGTTCCGGCCCGTTCCACTGGAAGAATATGTAAAAGTTGGTAACTCCATTTACAGCAAAAATATGGAACTTTCTAGAACAATCTCAAAAGTGGCTGACCTTGGAGGTAAAGATCCAGATCATGTTGTTGAACTATGTAATGAGGTTGTTCAAGAGGGACAATCAGTGTTAATATTTTGCTCTAGCCGGAAGGGTTGTGAATCAACTGCAAGGCACATTGCAAAGTTCCTGAAAAGATTTACCGTTGATGTTAATGATTGTGAGTTTGCTGATATTACTTCTGCTATTAATGCCCTGAGAAAGTGTCCTGGTGGGTTGGACCCCATATTGGAGGAAACTCTTCCTTCTGGTGTTGCATTTCATCATGCTGGCCTTACGGTTGAGGAGAGAGAGATTGTTGAAACTTGTTATCGGAAGGGTCTTATACGTGTTTTAACTGCCACATCAACCTTAGCTGCTGGGGTAAATCTGCCAGCTAGGAGAGTGATTTTCCGCCAACCTAGAATTGGTTGTGATTTTCTAGATGGGACGAGGTACAAACAGATGGCTGGTCGTGCTGGTCGAACTGGAATTGATACAAAAGGAGAAAGTATACTTATCTGTAAACCAGAAGAAGTGAAAAAAGTTACAGCACTTCTTAATAAAAGCTGTCCTCCTTTACATTCGTGTTTGTCAGAAGACATGAATGGAATGACACATGCAATCTTAGAAGTAGTGGCTGGAGGAATTGTTCAAACCGCTAGCGATATTAACCGTTATGTTAGATGTACACTTTTGAATTCTACAAAATCATTTCAAGATGTAGTAAAATCTGCACAAGAATCTCTTCGATGGTTGTGCCAAAGAAAATTTCTTGAATGGAATGAAGACACTAAACTCTATAATACCACACCTCTTGGACGAGCATCTTTCGGAAGTTCTCTTTGTCCAGAAGAATCACTTATTGTGTTAGCGGATCTCTCAAGGGCAAGGGAAGGATTTGTCCTTGCGTCTGACCTGCATTTAGTTTACTTAGTGACACCAATCAATGTTGATGTTGAGCCAGACTGGGAATTGTTCTATGAGCATTTTGTGAGATTGTCTCCTCTTGACCAGTCAGTTGGCAATCGAGTAGGTGTGACAGAACCATTCTTGATGCATATGGCGCATGGTGCACCACTACGCGCTCCAAACAAGTCAAGACATAATACAAGGTCATTACACAATCAGCAGAGAAACCAACTCGGGATTTCCAATGCAACAACCAACTATGATGATCAAACTCTTCGTATTTGTAGAAGATTCTATGTTTCACTCATTTTGTCACTTCTAGTTCAGGAAACTCCTGTGGGTGAAGTTTGTGAAGCATTCAAAGTTGCCAGGGGAATGGTTCAATCCTTGCAAGAGAATGCTGGTAGGTTTGCATCTATGGTTGCTGTGTTTTGTGAGAGACTTGGTTGGCAAGATCTTGAAGGCTTAGTTGCTAAGTTTCAAAATCGTGTATCTTTTGGAGTTAGAGCAGAGATTGTAGAACTTACCACCATTCCCTACGTGAAAGGTTCCCGAGCCAGATCACTCTATAAAGCAGGTTTACGTACACCTCTTGCAATTGCTGAAGCATCCATTCCAGAGATAGTAAAGGCACTTTTTGAATCTTCTTCGTGGGCCACAGAAGGTTCTGCCCAAAGGAGCTTACAATTTGGGTTAGCAAAAAAGATAAAGAATGGTGCACGCAAGATTGTTCTTGAAAAAGCTGAGGAGGCTAGTAATGCTGCTTTTTCAGCTTTTAAGTCTCTTGGGTTCAGTGTCCCACAGTTTGCTCCTCGAATATTATCTACTGCTCCTCATGATTCTATCCGGCAAGAAGCTGGTAGTACCTCTGGAAGTGACACAACTGACACTAGTCATAATTTTGTTGATGCAAATCACATTGTTAATTCTATTAAGTTTACTTCAGATAAAGAAAGAAAAGAATTAATTAAATTATCTGTTAGTGGTGCTCTGGCTCCTGTGGAAGAAAAATCAAGCAACAGGGTGCTATGTAGCTTGTCCACTTTTCCAGTTGCAGGACCTACAATGGATGAGAAGAATGGGAATTTTGACCTTGCTAAAAATCCAGACATGTCCCACTTCTCTGCTCCATTTCAGAAACCAAAGGATATATCTTGTGTAAAGGATGGCTGCCATGCTCATTGCACAGAGGAACAACATAAGAATGGAAATTTGGCTAGTGGTAATTCTGGTTGTTCAAGTAAGAAAGGTCCCATTAATGCAGTGAGTTGTCCAGGTGGGCTTGATTCATTTTTGGATATATGGGACACTGTGCCAGAGTTCTACTTTGATATCCATTACATTAAGCGTTTGGAATTGCACTCTGCTGCCCCCTTTGAGATACGTGGCATAGCTGTTTGTTGGGAAAACTCTCCTGTGTATTACGTTAATCTTCCCAGAGATATTCTGTTTTCTGACAAAGCAAAAGATGACTGTTTATCCATGAGTACATGTAGTGATAAACAAAAAGTTTCATCTTCTAAGTGTAACCAAGATTTAGAGATTGCTAGACATAGGTGGAGCAGAATTAGTAAAATAATAGGGAAAAGAAATGTCAGAAAGTACACCTGGAATTCAAAGATTCAGATTCAGGTGCTGAAAAGTCCTGCATTTCCGGTTCAGAGATTCAGATGTTTGGACACACCCGGAACAAGTGTGTACCTTGAAGTTATAGACAATTCATATGTGTTATTTCCCTCTATTCATGTTCAGGATGCAATTGATCTATGTATTGTGGCTTGGATTCTTTGGCCTGATGAAGAGAGTAGCTATACTCCAGACCTCGATAAGGAGGTTAAGAAGAGGTTATCCTCTGAGGAAGCTGCAGTGGCCAATCAGAGTGGTAGGTGGAGGAATCAGATGAGAAGGGCTGCTCATGATGGTTGCTGTCATCGGGTTGCTCAAACACGGGCATTATGTTCTGTTCTTTGGAAATTACTTATTTCTGAAAATCTTGCTGAAGTGCTTATGAGAATAGAAATCCCATTGGTGAATGTTCTTGCTGACATGGAGCTTTGGGGAATTGGTGTTGATTTGGAGAGATGCATCCAGGCTCGTAAATTGTTGGTTAACAGGCTAAAGCATCTTGAGAAGGAAGCTTATAAGCTGGCCGGCATAACATTTTCATTAAATATGCCAGCAGATATAGCAAAAGTGCTGTATGAACACTTGAAGCTGCCCATACCTAATGTGCAAAATAAGGGAAAACAACATCCGAGTACTGGCAAACATTGTTTGGATGCATTGAGGCATGAACATCCCATTGTTCCAGTCATTAAAGAACATCGAACAATGGCAAAGCTGTTGAACTCTACGTTAGGATCAATTTGTTCTCTGGCTAGGCTATCTGTAAGCACACAAAAGTATACAATACATGGTCATTGGTGCCAGACATCTACTGCAACCGGTCGGCTTTCAATGGAGGAACCTAATCTTCAGTGTCTTGTTGATGCTGCAGTGTGTTGA 5547 0.4159 MASPTHRTRLDQFYVSKKRKAATPVCKVGRSEKGARQGADASPSSKGTLDGYLIASQDGDGDSATAPNTVKRNLASEIGSFHANGLNKHTVLSAQGFDDSETSGATEFGQGAANLELKQFAAGFLSLYCSELHPSVDFPSEMKVDDHKSHGTVAEGHSCLPQKSKCTAREPGFGVENVSLNVKIDEDVKSGVVGNNTMGYVPISCSKVSDCGDTAAFETGFRKCSNTPKMSRNMAECYTPGSLIVKARVKETPKSVRGSSSFSPGEAFWNEAILLADSLCVPMGNDPSKAMWESNVVEDGPEMNNSCNLQNYDGKPRKILDQSKSRIWNMEAGTSFGLVGMHPKDSGKEASSLPVKHFDFSFEDNSLEENTMQNGHVGDQSNDTYMAGKQYGSGPTTSHTYEEKNEVQEKTLVNKLGKRNCHGNVSMTSNSPHNEVRTPISAHETDEANTPSTSVSFNDHFDLNSWLPPEICNIYRKKGISNLYNWQVDCLRVDGVLQRRNLVYCASTSAGKSFVAEILMLRRVITTGKMALLVLPYVSICAEKAEHLERLLEPLGKHVRSYYGNQGGGTLPKDTSVAVCTIEKANSLINKLLEEGRLSEMGIIVIDELHMVGDPRRGYLLELMLTKLRYAAGEGIPKSSDGESSGGSSDKADPAQGLQIVGMSATMPNVAAVADWLQAALYQTEFRPVPLEEYVKVGNSIYSKNMELSRTISKVADLGGKDPDHVVELCNEVVQEGQSVLIFCSSRKGCESTARHIAKFLKRFTVDVNDCEFADITSAINALRKCPGGLDPILEETLPSGVAFHHAGLTVEEREIVETCYRKGLIRVLTATSTLAAGVNLPARRVIFRQPRIGCDFLDGTRYKQMAGRAGRTGIDTKGESILICKPEEVKKVTALLNKSCPPLHSCLSEDMNGMTHAILEVVAGGIVQTASDINRYVRCTLLNSTKSFQDVVKSAQESLRWLCQRKFLEWNEDTKLYNTTPLGRASFGSSLCPEESLIVLADLSRAREGFVLASDLHLVYLVTPINVDVEPDWELFYEHFVRLSPLDQSVGNRVGVTEPFLMHMAHGAPLRAPNKSRHNTRSLHNQQRNQLGISNATTNYDDQTLRICRRFYVSLILSLLVQETPVGEVCEAFKVARGMVQSLQENAGRFASMVAVFCERLGWQDLEGLVAKFQNRVSFGVRAEIVELTTIPYVKGSRARSLYKAGLRTPLAIAEASIPEIVKALFESSSWATEGSAQRSLQFGLAKKIKNGARKIVLEKAEEASNAAFSAFKSLGFSVPQFAPRILSTAPHDSIRQEAGSTSGSDTTDTSHNFVDANHIVNSIKFTSDKERKELIKLSVSGALAPVEEKSSNRVLCSLSTFPVAGPTMDEKNGNFDLAKNPDMSHFSAPFQKPKDISCVKDGCHAHCTEEQHKNGNLASGNSGCSSKKGPINAVSCPGGLDSFLDIWDTVPEFYFDIHYIKRLELHSAAPFEIRGIAVCWENSPVYYVNLPRDILFSDKAKDDCLSMSTCSDKQKVSSSKCNQDLEIARHRWSRISKIIGKRNVRKYTWNSKIQIQVLKSPAFPVQRFRCLDTPGTSVYLEVIDNSYVLFPSIHVQDAIDLCIVAWILWPDEESSYTPDLDKEVKKRLSSEEAAVANQSGRWRNQMRRAAHDGCCHRVAQTRALCSVLWKLLISENLAEVLMRIEIPLVNVLADMELWGIGVDLERCIQARKLLVNRLKHLEKEAYKLAGITFSLNMPADIAKVLYEHLKLPIPNVQNKGKQHPSTGKHCLDALRHEHPIVPVIKEHRTMAKLLNSTLGSICSLARLSVSTQKYTIHGHWCQTSTATGRLSMEEPNLQCLVDAAVC 1848
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01292 1848 Gene3D - 1434 1698 IPR036397 GO:0003676
Viun8g01292 1848 Gene3D - 696 895 IPR027417 -
Viun8g01292 1848 Coils Coil 1706 1726 - -
Viun8g01292 1848 CDD SF2_C_Ski2 687 886 - -
Viun8g01292 1848 CDD DEXHc_POLQ-like 467 688 - -
Viun8g01292 1848 SMART ultradead3 479 694 IPR014001 -
Viun8g01292 1848 MobiDBLite consensus disorder prediction 1291 1312 - -
Viun8g01292 1848 SMART helicmild6 792 874 IPR001650 -
Viun8g01292 1848 SUPERFAMILY Sec63 N-terminal domain-like 1096 1219 - -
Viun8g01292 1848 Gene3D - 1060 1205 - -
Viun8g01292 1848 MobiDBLite consensus disorder prediction 1 68 - -
Viun8g01292 1848 Pfam DEAD/DEAH box helicase 496 669 IPR011545 GO:0003676|GO:0005524
Viun8g01292 1848 Gene3D - 466 688 IPR027417 -
Viun8g01292 1848 PANTHER DNA POLYMERASE I 496 1842 IPR002298 GO:0003887|GO:0006261
Viun8g01292 1848 SUPERFAMILY DNA/RNA polymerases 1679 1841 IPR043502 -
Viun8g01292 1848 FunFam Helicase and polymerase-containing protein TEBICHI 467 688 - -
Viun8g01292 1848 MobiDBLite consensus disorder prediction 636 655 - -
Viun8g01292 1848 Pfam Helix-turn-helix domain 879 970 IPR046931 -
Viun8g01292 1848 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 725 920 IPR001650 -
Viun8g01292 1848 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 493 685 IPR014001 -
Viun8g01292 1848 MobiDBLite consensus disorder prediction 1295 1312 - -
Viun8g01292 1848 Gene3D Taq DNA Polymerase; Chain T, domain 4 1701 1814 - -
Viun8g01292 1848 Pfam Helicase conserved C-terminal domain 725 874 IPR001650 -
Viun8g01292 1848 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 496 888 IPR027417 -
Viun8g01292 1848 FunFam Helicase and polymerase-containing protein TEBICHI 1062 1205 - -
Viun8g01292 1848 FunFam Helicase and polymerase-containing protein TEBICHI 699 894 - -
Viun8g01292 1848 Pfam DNA polymerase family A 1708 1842 IPR001098 GO:0003677|GO:0003887|GO:0006260
Viun8g01292 1848 FunFam Helicase and polymerase-containing protein TEBICHI 1701 1813 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01292 Viun-Chr8 18982240 19003226 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01292 K02349 - gmx:100813857 3053.08