Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01104 ATGGATTTCAGAAGCAAGGGAACAACATGGCACACGCTTTTCGTGTTATTTCTTCTATTTTCTGATATTTTTCCACTCTCTTTCTCAGCAGCCAATCAACCCCACAAAGCCAAGAACCTCGCCACCCCACATCGCCTTTCCTCCTCAGCTGTTTTCAAAGTTCAAGGAAATGTGTACCCTCTTGGGCATTACACAGTGATTCTCAACATTGGCTATCCTGCTAAGCCTTACGACCTTGACATAGACTCGGGTAGTGACATCACTTGGGTTCAGTGTGATGCACCATGTAAAGGTTGCACCAAGCCACGTGAGCAACTTTATAAACCTAATCACAACCTTGTGCAATGTGCGGAACAATTGTGTTCTGAAGTGCACTTTTCAGCAGACCATTATTGTGCTGCCCCAGATGACCAATGTGACTATGAAGTTGAGTATGCAGATAATGGATCATCTCTGGGTGTGCTAGTTCGGGACTACATTAATTTTCAATTCATCAATGGCTCTGTGGTGCGCCCTAAGATAGCCTTTGGGTGTGGATATGATCAAAAGTATTCTGGTTCAACATCCCCACCTTCTACAGCAGGAGTTCTTGGCCTTGGCAATGGCAGAGCAAGCATTTTAACTCAGCTTCATTCTTTGGGTCTGATACGCAATGTAGTTGGACACTGCCTAAGTTCAAGAGGAGGAGGGTTTTTATTCTTTGGAGATGATCCCGTTCCCACTTCAGGGATTTTTTGGACATCCATGCTGCATAGTTCTTCGGAAAAACACTACAGCTCAGGACCAGCAGAACTGTTGTTCAATGGAAAGGCCACTAAAGTTAAGGGTCTTGAGCTTATCTTCGATAGTGGGAGCTCTTACACATACTTTAACTCCCTGGCGTATCAAGCTGTTGTAAATTTGGTGACTGATGATTTAAAGGGGAAACAGTTGACAAGAGAAACCGATGATCCATCACTTCCAATTTGTTGGAAGGGTCCAAAATCTTTCAAATCGTTAAGTGATGTCAAGAAATACTTCAAACCCTTAGCATTTAGCTTCACAAAAACTAAGAATGTGCAGATGCATCTTGCGCCAGAAGCTTATCTTATTATCACTAAACATGGCAATGTCTGCTTGGGGATTCTTGATGGCACTGAAGTTGGACTTGAAAATCTCAACATAATAGGAGACATTTCTTTACAAGATAAAATGGTCATTTATGACAACGAGAAGCAGCAGATTGGATGGGTTTCTTCAAATTGTGATAGGCTTCCCAATGTGGAACGTGATTTGGAAGGCGATTTTCCACACCCATACGCAGCCAATTTGGGTATCTTTGGGAACGGTTACCCTGCATCTTTTGAAAATATAGACGATCAATGA 1365 0.4264 MDFRSKGTTWHTLFVLFLLFSDIFPLSFSAANQPHKAKNLATPHRLSSSAVFKVQGNVYPLGHYTVILNIGYPAKPYDLDIDSGSDITWVQCDAPCKGCTKPREQLYKPNHNLVQCAEQLCSEVHFSADHYCAAPDDQCDYEVEYADNGSSLGVLVRDYINFQFINGSVVRPKIAFGCGYDQKYSGSTSPPSTAGVLGLGNGRASILTQLHSLGLIRNVVGHCLSSRGGGFLFFGDDPVPTSGIFWTSMLHSSSEKHYSSGPAELLFNGKATKVKGLELIFDSGSSYTYFNSLAYQAVVNLVTDDLKGKQLTRETDDPSLPICWKGPKSFKSLSDVKKYFKPLAFSFTKTKNVQMHLAPEAYLIITKHGNVCLGILDGTEVGLENLNIIGDISLQDKMVIYDNEKQQIGWVSSNCDRLPNVERDLEGDFPHPYAANLGIFGNGYPASFENIDDQ 454
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01104 454 FunFam Aspartic proteinase Asp1 isoform A 240 419 - -
Viun8g01104 454 PANTHER ASPARTYL PROTEASES 44 409 IPR001461 GO:0004190|GO:0006508
Viun8g01104 454 Gene3D Acid Proteases 39 236 IPR021109 -
Viun8g01104 454 PRINTS Pepsin (A1) aspartic protease family signature 387 402 IPR001461 GO:0004190|GO:0006508
Viun8g01104 454 PRINTS Pepsin (A1) aspartic protease family signature 70 90 IPR001461 GO:0004190|GO:0006508
Viun8g01104 454 PRINTS Pepsin (A1) aspartic protease family signature 279 290 IPR001461 GO:0004190|GO:0006508
Viun8g01104 454 SUPERFAMILY Acid proteases 56 420 IPR021109 -
Viun8g01104 454 CDD nucellin_like 62 415 IPR033823 GO:0004190
Viun8g01104 454 Pfam Xylanase inhibitor N-terminal 64 236 IPR032861 -
Viun8g01104 454 Pfam Xylanase inhibitor C-terminal 277 410 IPR032799 -
Viun8g01104 454 ProSiteProfiles Peptidase family A1 domain profile. 64 411 IPR033121 -
Viun8g01104 454 FunFam Aspartyl protease family protein 40 236 - -
Viun8g01104 454 Gene3D Acid Proteases 239 422 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01104 Viun-Chr8 13719158 13722727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01104 48 419 Miscellaneous Gene Families AT1G44130 58.713 1.56e-168 478
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01104 - - gmx:100790299 769.229
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01104 8 13719158 13722727 Viun8g01104 8 13719158 13722727 ECH