Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01048 ATGGCGGAGGATACGGCTCCTCTTGGCGGCGGCGATTCGTCGTCGTCCGCGAGGGCTCCGTCGTCCTTCGTGAAGAAAGGCGACCGACAAATGTTCACAGTGGAGCTTCGGCCGGGAGAGACCACCATAGTGTCGTGGAAGAAGCTGATGAAAGACACCAATAAGGTTAACAATAAGGGACCCACTTCCGCACCAGACTACCTTCCCAATGGGAACCCTGCGCTCGAGGCCAGAATCGCTCCGGGACAACCTAAGGAGACTGAAGAACAAGGCGCTCCTCAGCCAAATCGTTTCAGTGCTGTAATAGAAAAGATTGAACGCCTTTACATGGGTAAGGATAGCAGTGATGAGGAGGATCTACTTGATGTTCCTGATGATCAGTATGATACAGAAGACTCTTTCATTGATGATGCTGAATTGGATGAGTATTTTGAGGTTGATAACTCTGCAATCAAGCATGATGGATTCTTTGTAAATAGGGGGAAATTGGAACGCATAAATGAACCTCCAGTATTACCTATCCAGCAAGCAAAGAAAAGGCGTCGAAAAGATATATCAAAGAATCCTGGAGAAAATATTGATGGTCATGTATCAAATAAACTTGTAAAAGTGCGAAAGACTGCCGTTGGGAAGACTGCATCATTACCTGTGAAAAACATGCTCAGTTCCTCACATAATTTTGCCGTACCTGGTGAACATTATGAAGACATGAAATTTCAGAAGCAAATGGATGTCTCTGGAATTAGTTTGAAAAGGAAAACTGCTGACGCTACACCAATTTCGGACCCCCCTGTCTGTTTAAAAGTATCAAATAATGATCCTCCTGCTGCAGAAGGTCCTGATAAACAGAAGACTGGAATGTCTCAGTCTAAGAACACTGGTGACAAACTTAAAGATGCAAGTGGATTGGTTGATATTTCTCATCACAAGTACCATGAAAAAAATTTATCTGCACATTCAAAATCCCAACCTGGAAAATCCTCAAGTAGTGTTGACAATTTAGAAAACACTGGCCAGTCAAAAGATAAAAATTTCATCCGGGAACTGCCAGATCTAAACTTGGCTGCGGGAAAAATTGCTGTACATGCACCACAGGCAAGCCAAGGGAAAGTATCAAAGGATTTAATTAACCGTCTTATGAGTATTCTTGGGCATCTGATTCAACTGAGAACTCTAAAGAGAAACTTAAAAATTATGATCAGTATGGGTTTGTCTGCAAAGCAGGAGAAAGATGATAGGTTTCAACAGATAAAGAAGGAAGTTGTTGAGATGATTAAGATGCAGGTCCCATCCATGGAATCGAAGCTACAGCAGCAAGCTGAAGCATCTGGGGAAAAAGAAATGGGTCCTGATGGAAAAGCTACAACTAAAAACATTTTTAGTATGGACACTGCATTGGAAGACAGGATTTGTGATCTCTATGACCTTTTCGTTGATGGTTTAGATGAAAATGCCGGTCCGCGAATCAGAAAGTTGTATGCTGAGCTTGCAGAATTATGGCCAACTGGTTACATGGACAACCATGGAATCAAGCGTGCAATTTGCAGGTCAAAAGAGAGGCGCCGAGCACTGCACATCAGACATAAGGATCGGGAGAAAATTAAGAAGAATAAGTTATTTGCACCTCGACGAGATGAGAATGCTCGATTGGATGCTAATCCAATTACTTCGCAACAGCCCATGCGAGAGAGATTAGCTACAGATTCTAGCAGTCTTAATCATACTTCAGTAAACAAGGCAGTTTCTATTACAGTTGCCGCTCCACGGGTGTACAATCCTTCTTTGAATGGTTCAAAACAAGAAAAAGCAAAGGGAAGTTCTAGTGGTTCTCTGGATGATGGCGGGGATGAAGATGTTTTAGTAAAGAAGAAAGTAAAGAGAAGGCCTGAACAGGGTTTAGAAGGAAATCATTTTCGCCCTGGGAAGATGACGGCTTTTTCGCGAGGTGAAAAGCCTAGGTCTCTAAAGCAGTCTGCAGGTGTTCTCCCCAAATCAAACATTCAGCCAAGTTCTCTTCATGGTCTTGAGCAGTCAAGCTAA 2040 0.4289 MAEDTAPLGGGDSSSSARAPSSFVKKGDRQMFTVELRPGETTIVSWKKLMKDTNKVNNKGPTSAPDYLPNGNPALEARIAPGQPKETEEQGAPQPNRFSAVIEKIERLYMGKDSSDEEDLLDVPDDQYDTEDSFIDDAELDEYFEVDNSAIKHDGFFVNRGKLERINEPPVLPIQQAKKRRRKDISKNPGENIDGHVSNKLVKVRKTAVGKTASLPVKNMLSSSHNFAVPGEHYEDMKFQKQMDVSGISLKRKTADATPISDPPVCLKVSNNDPPAAEGPDKQKTGMSQSKNTGDKLKDASGLVDISHHKYHEKNLSAHSKSQPGKSSSSVDNLENTGQSKDKNFIRELPDLNLAAGKIAVHAPQASQGKVSKDLINRLMSILGHLIQLRTLKRNLKIMISMGLSAKQEKDDRFQQIKKEVVEMIKMQVPSMESKLQQQAEASGEKEMGPDGKATTKNIFSMDTALEDRICDLYDLFVDGLDENAGPRIRKLYAELAELWPTGYMDNHGIKRAICRSKERRRALHIRHKDREKIKKNKLFAPRRDENARLDANPITSQQPMRERLATDSSSLNHTSVNKAVSITVAAPRVYNPSLNGSKQEKAKGSSSGSLDDGGDEDVLVKKKVKRRPEQGLEGNHFRPGKMTAFSRGEKPRSLKQSAGVLPKSNIQPSSLHGLEQSS 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01048 679 PANTHER CAPZ-INTERACTING PROTEIN AND RELATED PROTEINS 14 639 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 314 344 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 53 98 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 591 607 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 254 298 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 434 454 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 175 190 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 551 573 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 591 679 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 540 573 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 320 340 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 659 679 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 175 196 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 1 30 - -
Viun8g01048 679 MobiDBLite consensus disorder prediction 615 635 - -
Viun8g01048 679 Pfam HPC2 and ubinuclein domain 125 164 IPR014840 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g01048 Viun-Chr8 12512381 12528753 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01048 - - gmx:100799794 862.062
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01048 8 12512381 12528753 Viun8g01048 8 12512381 12528753 ECH
Viun8g01048 8 12512381 12528753 Viun9g02334 9 32877714 32887913 PCT