Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g01007 ATGAAAGTGACTTGGAAGAACAACAAGAAGAAACGTTGTTTACCCACGTTGTCTCACTTCACTGACCTTCCCTTCGAGCATAACGACCAACCCCATTCACAAGATGGCGCGCGTGTTCCCGATCCCGACCAATCTCGTGCTGCACAATTGGCGGATGAATTCCAAGCTCAAGGAGACAAGCTCGCTATGGATGGGAAGTACCAGAAAGCACTAAGTAAATGGGAAGCTGCTCTTGTGTTGGCACCTGATGTTCCAATTTTGCATGAACAAAAAGCCCAAGTTTTACTGGAAATTGGAGACACTTGGAATGCTCTAAAGGCTGCAACTCGAGCGACTGAATTGGACCCATCATGGGCTGAGGCATGGGTCACACTTGGCAGAACACAACTGAATTTTGGTGAGCCAGATAATGCTATTGAAAGCTTTGACCGAGCTTTAGCTCTCAAGCCTGATTACGAGGAAGCTAAAGAAGATAGGAAAACCTCTTTACATCTTGTAAAGAAGAGAAAGCAACTTCATTCATCTGGTTTGAGTGCCACTCAAAATCGCTATGTGGTGGGTGAAAAGGATGAAAACCAGTGA 582 0.4553 MKVTWKNNKKKRCLPTLSHFTDLPFEHNDQPHSQDGARVPDPDQSRAAQLADEFQAQGDKLAMDGKYQKALSKWEAALVLAPDVPILHEQKAQVLLEIGDTWNALKAATRATELDPSWAEAWVTLGRTQLNFGEPDNAIESFDRALALKPDYEEAKEDRKTSLHLVKKRKQLHSSGLSATQNRYVVGEKDENQ 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g01007 193 MobiDBLite consensus disorder prediction 171 193 - -
Viun8g01007 193 ProSiteProfiles TPR repeat region circular profile. 119 151 - -
Viun8g01007 193 MobiDBLite consensus disorder prediction 21 46 - -
Viun8g01007 193 SUPERFAMILY TPR-like 49 170 IPR011990 GO:0005515
Viun8g01007 193 SMART tpr_5 119 152 IPR019734 GO:0005515
Viun8g01007 193 SMART tpr_5 51 84 IPR019734 GO:0005515
Viun8g01007 193 SMART tpr_5 85 118 IPR019734 GO:0005515
Viun8g01007 193 Pfam Tetratricopeptide repeat 91 152 - -
Viun8g01007 193 ProSiteProfiles TPR repeat profile. 119 152 IPR019734 GO:0005515
Viun8g01007 193 MobiDBLite consensus disorder prediction 173 187 - -
Viun8g01007 193 PANTHER OSMOSIS RESPONSIVE FACTOR 1 191 - -
Viun8g01007 193 Gene3D Tetratricopeptide repeat domain 41 186 IPR011990 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g01007 37 163 EF-hand Containing Proteins AT2G32450 29.134 3.31e-08 50.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g01007 - - gmx:100305761 334.724
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g01007 8 11493383 11498433 Viun8g01007 8 11493383 11498433 ECH