Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00983 ATGGTGAAGGAAACGGAGTACTACGATATCCTCGGGATCACTCCCTCTGCCTCCGAAGACCAAATTCGCAAGGCCTATTACCATAAGGCAATGCAAGTTCATCCCGATAAAAACCCGAACGATCCTCGCGCTGCCGAGAAGTTCCAGATATTGGGTGAAGCGTACCAAGTTTTGAGTGATCCGGTTCAAAGGAATGCGTACAATCAAAATGGGAAGCATTCTGTATCGAGGGAAACTATGCTTGACCCCATGGCTGTCTTCGCCCTGCTCTTTGGAAGTGAATTGTTTGAGGACTACATAGGGCATCTAGCTGTGGCATCAATGGCTTCTTCTGAGCTAGCTGATGACAGTGAGGATCCTGATAAACTGAATGAGAAGTTAAAGGCTGTCCAAAGAGAAAGGGAAGAAAAGCTAGCAAGAAATTTGAAAGATTATCTTGCCCAATATGTTCGTGGTGACAAAAAGGGATTCTTCCTACGAGCAGAATCTGAAGCAAGACGGCTTTCTCGTGCTGCATTTGGAGTAGATATGTTACATACCATCGGCTACATATATTCAAGACAGGCAGCACAAGAACTAGGGAAAAAGGCCATTTATCTTGGAGTGCCATTTTTGGCTGAATGGGTACGCAATAAAGGACATTTCTGGAAATCACAACTCACAGCTGCTAAAGGTGCTTATCAATTAATTCAGCTTCAAGAAGACATCCGCAAGCAATTTAAAATGGATGGTAGTAGTGGCCCTGAAAATGATGTTGACTCTCACATTCGCCTCCATAAGGACACATTGATAAGTTCCTTGTGGAAGTTAAATGTAGTGGACATAGAAGTAACCCTTGTACACGTGTGTCAAATGGTGCTAAAGGAAAACAATGTCAAGAAAGAGGAACTTAAAGTTCGGGCTACTGCTCTTAAAATTCTTGGGAAGATATTTCAGGACAAGTATCCAAAAGGAGAAACTTTGAGGAAGAAGATTGCAGCTAGTTCTGATGACGAAGAAAGCACTTCTGATTCTTCAGACGATGAATCGCCTAGAGGAATTTCCTATCGAACTCCCTTTTTCACGCAGGGTCTCGGTAGACTTTTCAAATGCCTCTGTAATCCTGCATTTGATGTGGATGATGAAGAGATAGTTTACAAAAGCAAATGA 1149 0.4273 MVKETEYYDILGITPSASEDQIRKAYYHKAMQVHPDKNPNDPRAAEKFQILGEAYQVLSDPVQRNAYNQNGKHSVSRETMLDPMAVFALLFGSELFEDYIGHLAVASMASSELADDSEDPDKLNEKLKAVQREREEKLARNLKDYLAQYVRGDKKGFFLRAESEARRLSRAAFGVDMLHTIGYIYSRQAAQELGKKAIYLGVPFLAEWVRNKGHFWKSQLTAAKGAYQLIQLQEDIRKQFKMDGSSGPENDVDSHIRLHKDTLISSLWKLNVVDIEVTLVHVCQMVLKENNVKKEELKVRATALKILGKIFQDKYPKGETLRKKIAASSDDEESTSDSSDDESPRGISYRTPFFTQGLGRLFKCLCNPAFDVDDEEIVYKSK 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00983 382 SMART dnaj_3 5 63 IPR001623 -
Viun8g00983 382 Gene3D DnaJ domain 1 85 IPR036869 -
Viun8g00983 382 CDD DnaJ 6 60 IPR001623 -
Viun8g00983 382 SUPERFAMILY Chaperone J-domain 2 101 IPR036869 -
Viun8g00983 382 ProSitePatterns Nt-dnaJ domain signature. 48 67 IPR018253 -
Viun8g00983 382 PRINTS DnaJ domain signature 26 41 IPR001623 -
Viun8g00983 382 PRINTS DnaJ domain signature 43 63 IPR001623 -
Viun8g00983 382 PRINTS DnaJ domain signature 8 26 IPR001623 -
Viun8g00983 382 Pfam X-domain of DnaJ-containing 131 314 IPR026894 -
Viun8g00983 382 Pfam DnaJ domain 6 68 IPR001623 -
Viun8g00983 382 ProSiteProfiles dnaJ domain profile. 6 71 IPR001623 -
Viun8g00983 382 MobiDBLite consensus disorder prediction 322 348 - -
Viun8g00983 382 PANTHER DNAJ HEAT SHOCK N-TERMINAL DOMAIN-CONTAINING PROTEIN 2 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00983 Viun-Chr8 10937328 10942537 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00983 7 81 Miscellaneous Gene Families AT1G16680 41.558 8.24e-09 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00983 - - gmx:100793811 686.411
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00983 8 10937328 10942537 Viun8g00983 8 10937328 10942537 ECH