Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00945 ATGCTCATACAAACTACTCTCCCCTTTGCATGCACTCCAAGAAGTGTTCCCCACCGCATGCTGCCACCGAAATGTGTCCTCTCAGTGTCGCCGCCATCGAAAGCGCGGAGGGCCCACTCATTGCCGCCGGAAAAGTTAGAGGTTTTCAGGTCGCTGGAAGGGTGGGCTTCGCAGTGTGTCCTTCCGCTGCTGAAACCCGTGGAAAAAAGCTGGCAACCCGAGAGTTTCGTTCCCGATCCATCGTTGCCGTTTGAAGAGTTCATGGAGGAGGTGAAGGCTCTTCGCGATCGAACGAAGGAGCTATCTGACGAGTACTTCTTGGTGCTGGTCGGTGACATGATTACTGAGGAAGCTCTTCCCACTTACCAGACCATAATGAACAGCCTCGACGGCGTGAAAGACGAGTGCGGAACAAGCCCAAGCCCGTGGGCCGTGTGGACTCGGGCCTGGTCCGCGGAAGAGAACAGACATGGGGATTTGCTGAGAACATACTTGTATCTTTCTGGTCGTGTTAACATGAACATGATTGAAAAGACCATTCATTACCTCATTGCTGCAGGCATGGACCCTGGTTTTGAGAACAACCCATATCTGGGGTACGTATACACGTCATTCCAAGAGCGAGCCACGTTCGTGTCACATGGTAACACTGCAAGGCTCGCAAAGGAGGGTGGTGATCCTGTGCTGGCGCGCATATGCGGAACCATTGCTGCAGATGAGAAAAGACACGAGAAAGCGTACTCGAGGATCGTGGAGAAGCTTCTAGAAGTGGATCCGACGGGAACAATGGTGGCAATAGGAAGCATGATGGAGAAAAAGATCACCATGCCGGCGCATCTTATGTACGATGGGGAGGACCCCAGGCTATTCGAGCACTACGCTGCAGTGGCGCAACGTGTGGGAGTGTACACGGTGAATGACTACGCAGACATCTTGGAGTTCCTGATCGGACGGTGGAGATTGGAGAAGGTGGAGGGTTTGAGAGAGGAGGGAAAGAGGGCACAGGATTACGTGTGTGGGTTAGCACCGAGGATTAGGAAGCTGCAAGAACGTGCTGAGGAGCGAGCGCGAAAGATGAAACCTCGTAGCATTAAGTTCAGCTGGATCTTCCATAAAGAGCTGCAGTTGTGA 1131 0.5296 MLIQTTLPFACTPRSVPHRMLPPKCVLSVSPPSKARRAHSLPPEKLEVFRSLEGWASQCVLPLLKPVEKSWQPESFVPDPSLPFEEFMEEVKALRDRTKELSDEYFLVLVGDMITEEALPTYQTIMNSLDGVKDECGTSPSPWAVWTRAWSAEENRHGDLLRTYLYLSGRVNMNMIEKTIHYLIAAGMDPGFENNPYLGYVYTSFQERATFVSHGNTARLAKEGGDPVLARICGTIAADEKRHEKAYSRIVEKLLEVDPTGTMVAIGSMMEKKITMPAHLMYDGEDPRLFEHYAAVAQRVGVYTVNDYADILEFLIGRWRLEKVEGLREEGKRAQDYVCGLAPRIRKLQERAEERARKMKPRSIKFSWIFHKELQL 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00945 376 Gene3D Ribonucleotide Reductase, subunit A 30 376 IPR012348 GO:0016491
Viun8g00945 376 Pfam Fatty acid desaturase 44 370 IPR005067 GO:0006631|GO:0045300
Viun8g00945 376 PANTHER ACYL- ACYL-CARRIER-PROTEIN DESATURASE-RELATED 34 374 IPR005067 GO:0006631|GO:0045300
Viun8g00945 376 Coils Coil 84 104 - -
Viun8g00945 376 FunFam Stearoyl-[acyl-carrier-protein] 9-desaturase, chloroplastic 30 376 - -
Viun8g00945 376 PIRSF Dlt9_acylACP_des 7 376 IPR005067 GO:0006631|GO:0045300
Viun8g00945 376 SUPERFAMILY Ferritin-like 35 375 IPR009078 -
Viun8g00945 376 CDD Acyl_ACP_Desat 44 352 IPR005067 GO:0006631|GO:0045300
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00945 Viun-Chr8 9926970 9928687 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00945 23 376 Acyl Lipid Metabolism Gene Families AT1G43800 68.889 0.0 540
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00945 K03921 - gmx:100816146 624.78