Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00943 ATGGCTTCTCTGCCATTCCTTTCGCAAATTTCTCACTCTCTTTCTTTTCCGCGGCATGGCCACTGCTTCCATCGCCACTTCCCTACCGCTCTCGCTGCTTCCTACCAATCAGGACCCTCCTCTGGAAACTCATGGCGCGTTGACATTGCAGATTCTAAAACTCAAGTATCTCGTGTTCCGGTTTTGACTTCCTCGGAGGCCTATGAAAGGCTAAAATCATTTAGAGAAAAGATAAAGGGAAAGCAACAATTCCTTGCTATGTATTCTAGTATTTTTGATGGGATAACAACAGACCCAGCTGCTATGGTTATTCCCATGGATGACCACATGGTCCACAGAGGCCATGGTGTGTTTGATACTGCTGCAATAATGAACGGATACCTATATGAGCTAGATCAACACCTTGATCGCTTTTTAGGTTCAGCATCCTTGTCTAAAATAGATCCCCCATTTGATCGTGGAAGCATAAGGAGAATACTAATAGAAACTGTAAGTGCTTCCAAGTGTAGAAAAGGATCACTTAGGTATTGGCTCTCCGCAGGACCTGGGGACTTTCAGTTATCTCCCTCTAACTGCCACCAATCAAGTCTTTATGCAATAGTAATACAGGATCTGTCATCGTCGCCTAATTTCAGGGGAGTTAAAGTTGTTACTTCATCTGTTCCCATTAAACACCCCAAGTTTGCCATTACCAAGAGTGTGAATTATCTTCCAAATGTCCTCTCAAAGGTGGAAGCTGAAGAAGCTGGTGCTTTTGTAGGAATTTGGTTAGATGATGAAGGTTTTGTGGCAGAGGGGCCTAATATGAATGTGGCCTTTGTCACTAAAGAGAAAGAACTAATAATGCCTCACTTTGACAAAATTTTAAGTGGCTGCACAGCTAAGAGAGTTTTAACCCTTGCCGAGGATTTGTTAAGGGAGGGTAAGCTTAAGGGGATAAGGGTGAAAAATGTGACTGTTGAAGAAGGTAAGAAAGCAGAAGAAATGATGCTTCTTGGCAGTGGAATTCTTGTTTGCCCTGTAGTGCAGTGGGATGAACACGTTATTGGTGATGGCAAAGAAGGCCCTGTAACACAGGCGCTCTTCAATCTAATTGTTGATGACATGAAATCAGGACCCTCTAGCGTTCGTATACCTGTTCCATATTGA 1149 0.4326 MASLPFLSQISHSLSFPRHGHCFHRHFPTALAASYQSGPSSGNSWRVDIADSKTQVSRVPVLTSSEAYERLKSFREKIKGKQQFLAMYSSIFDGITTDPAAMVIPMDDHMVHRGHGVFDTAAIMNGYLYELDQHLDRFLGSASLSKIDPPFDRGSIRRILIETVSASKCRKGSLRYWLSAGPGDFQLSPSNCHQSSLYAIVIQDLSSSPNFRGVKVVTSSVPIKHPKFAITKSVNYLPNVLSKVEAEEAGAFVGIWLDDEGFVAEGPNMNVAFVTKEKELIMPHFDKILSGCTAKRVLTLAEDLLREGKLKGIRVKNVTVEEGKKAEEMMLLGSGILVCPVVQWDEHVIGDGKEGPVTQALFNLIVDDMKSGPSSVRIPVPY 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00943 382 SUPERFAMILY D-aminoacid aminotransferase-like PLP-dependent enzymes 92 370 IPR036038 GO:0003824
Viun8g00943 382 PANTHER AMINO-ACID AMINOTRANSFERASE 61 375 - -
Viun8g00943 382 CDD PLPDE_IV 108 365 - -
Viun8g00943 382 Gene3D - 207 374 IPR043132 -
Viun8g00943 382 FunFam D-amino-acid transaminase, chloroplastic 63 202 - -
Viun8g00943 382 FunFam D-alanine aminotransferase 206 372 - -
Viun8g00943 382 Pfam Amino-transferase class IV 116 343 IPR001544 GO:0003824
Viun8g00943 382 Gene3D - 63 203 IPR043131 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00943 Viun-Chr8 9906533 9910032 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00943 K18482 - gmx:100794026 649.432
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00943 8 9906533 9910032 Viun8g00943 8 9906533 9910032 ECH