Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00919 ATGTATGAGCCAAAAAACATCCTCATTACTGGTGCTGCTGGTTTCATAGCCTCACATGTGACTACCAAGCTAATAAAAAAGTACCCTAAATACAAGATTGTAGTTCTTGATAAAGTAGACTACTGCTCCACTTTCAGGAATTTGAGGGCATGTATTACCTCACCAAACTTCAAATTTATTAGGGGTGATATAGCTACTGCAGATATTGTGAATCATATTCTGATAGAAGAGGAAATAGACACCATTATGCATTTTGCTGCTCAAACTCATGTGGACAATTCATTTGGGAACTCCATGGAATTCACCTACAACAACATCTATGGCACTCATGTGCTTCTTGAAGCTTGCAGGGTCACCAATTATGTGAAAAGGTTCATTCATGTGAGCACAGATGAAGTCTATGGTGAAACAGACTTAGAAGATAACATTGGAAACCATGAGGCATCTCAGCTTCTACCCACCAATCCTTACTCTGCATCAAAAGCAGGAGCAGAAATGTTGGTGATGGCGTATCACAGATCTTATGGTCTTCCAGTTATAACTTCCAGAGGCAATAATGTGTATGGTTCCAACCAATACCCAGAAAAGCTTGTTCCTAAGTTCATTCTTCTTGCCATGAGGGGTGAGAAATTGCCAATCCATGGAGATGGATCCAATGTGAGGAGCTACCTACACTGTGAAGATGTTGCAGAAGCTTTTGATGTGATACTGCACAAAGGAGAGATTGGGCAAATCTACAACATTGGCACCAAGAAAGAGAGGAGTGTGTTGGATGTTGCAGAGGATATATGCAAACTCTTCAAACTGAATCCTAAAGAGGTTATTGAGTTTGTTCAAGATAGGCCTTTCAATGATAAGAGATATTTTCTTGATGATCAAAAGCTGAAACAACTTGGTTGGGAGGAGAGAATTTCATGGGAGGAAGGATTGAAGAAAACAATTGAATGGTACAAAAAAAATCCTGATTGGTGGGGTGATGTTTCTGCTGCTTTAAACCCTCATCCACGTTTCACAGCCATTAATCTCTCTGATGAGGCTCAATGGTCCTTTCAATATGGATACTCTAGGCTTGCAAGGTCATTCACTGAAGTTGGAAGAAAAAGTAGTTCAAGATTCAAGTTTTTGATATATGGGAGGACTGGTTGGATAGGGGGTTTGTTGGGAAAGCTTTGTGATGAAGAGAGAATTGATTGGGAATATGGGAAAGGGAGATTGCAAGATAGAAAATCACTTGAGGAGGACATAAGAACAGTAAAACCAACCCATGTTTTGAATGCTGCTGGTGTTACAGGAAGACCTAATGTTGATTGGTGTGAATCACACAAGGTTGAAACTATAAGGACTAATGTTGTAGGCACTTTAACACTGGCTGATGTTTGCAAGGAACACAACTTGTATATGATGAATTTTGCAACTGGTTGCATATTTGAGTATGACAAGGACCATCCTCTGGGATCAGGCATTGGGTTCAAGGAAGAGGACAAGCCAAATTTCACAGGCTCCTTTTATTCCAAGACCAAGGCCATGGTGGAGGAGCTTCTAAGAAACTATGGAAATGTGTGCACATTAAGAGTTAGAATGCCAATATCCTCAGATCTTAGCAATCCAAGAAACTTCATCACAAAGATTTCTCGTTACAATAAAGTGGTAAACATACCTAACAGCATGACAGTGCTGGATGAACTCTTACCCATATCCATTGAAATGGCTAAGAGGAACTTAAGAGGGATTTGGAACTTCACCAACCCAGGGGCGATTAGCCACAATCAGATATTAGAATTGTATAGGGATTACATAGATCCAAAGTTTAAATGGGCGAATTTTGATTTGGAAGAACAAGCAAAGGTAATAGTTGCTCAAAGGAGTAACAATGAAATGGATGCTTCCAAGCTCAAAAAAGAGTTCCCAGAATTGTTGTCCATCAGAGATTCCGTTATCAAGTTTGTCTTTGAGCCTAACAAGAAAACTTGA 1971 0.3978 MYEPKNILITGAAGFIASHVTTKLIKKYPKYKIVVLDKVDYCSTFRNLRACITSPNFKFIRGDIATADIVNHILIEEEIDTIMHFAAQTHVDNSFGNSMEFTYNNIYGTHVLLEACRVTNYVKRFIHVSTDEVYGETDLEDNIGNHEASQLLPTNPYSASKAGAEMLVMAYHRSYGLPVITSRGNNVYGSNQYPEKLVPKFILLAMRGEKLPIHGDGSNVRSYLHCEDVAEAFDVILHKGEIGQIYNIGTKKERSVLDVAEDICKLFKLNPKEVIEFVQDRPFNDKRYFLDDQKLKQLGWEERISWEEGLKKTIEWYKKNPDWWGDVSAALNPHPRFTAINLSDEAQWSFQYGYSRLARSFTEVGRKSSSRFKFLIYGRTGWIGGLLGKLCDEERIDWEYGKGRLQDRKSLEEDIRTVKPTHVLNAAGVTGRPNVDWCESHKVETIRTNVVGTLTLADVCKEHNLYMMNFATGCIFEYDKDHPLGSGIGFKEEDKPNFTGSFYSKTKAMVEELLRNYGNVCTLRVRMPISSDLSNPRNFITKISRYNKVVNIPNSMTVLDELLPISIEMAKRNLRGIWNFTNPGAISHNQILELYRDYIDPKFKWANFDLEEQAKVIVAQRSNNEMDASKLKKEFPELLSIRDSVIKFVFEPNKKT 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00919 656 FunFam Bifunctional dTDP-4-dehydrorhamnose 3,5-epimerase/dTDP-4-dehydrorhamnose reductase 363 656 - -
Viun8g00919 656 Gene3D - 362 656 - -
Viun8g00919 656 CDD dTDP_HR_like_SDR_e 373 645 - -
Viun8g00919 656 CDD dTDP_GD_SDR_e 5 322 IPR005888 GO:0008460|GO:0009225
Viun8g00919 656 Pfam NAD dependent epimerase/dehydratase family 402 538 IPR001509 -
Viun8g00919 656 Pfam GDP-mannose 4,6 dehydratase 8 313 IPR016040 -
Viun8g00919 656 Gene3D - 7 311 - -
Viun8g00919 656 FunFam UDP-glucose 4,6-dehydratase 7 208 - -
Viun8g00919 656 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 371 646 IPR036291 -
Viun8g00919 656 PANTHER DTDP-D-GLUCOSE 4,6-DEHYDRATASE-RELATED 1 336 - -
Viun8g00919 656 Gene3D - 198 320 - -
Viun8g00919 656 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 328 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00919 Viun-Chr8 9406217 9408455 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00919 6 317 Miscellaneous Gene Families AT1G02000 23.881 2.50e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00919 K12450 - gmx:100776241 1246.49
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00919 8 9406217 9408455 Viun8g00919 8 9406217 9408455 ECH