Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00887 ATGAGTTTCAAAAGCTGTTCTCTTCTCTGCATAGCGATTCTGCTTGCACTCTCTTCTGCTATTGATGGCTTTAACATCACAGAGTTGTTGGAAAAGTATCCAGATCTGTCATCATTCAACAGGTACATCACCGAAGCCAAGCTTGCAGACCAAATCAACAGCCGCAACACCATCACAGTTCTTGCGGTTGAGAACGGTGCCATCTCTTCCATTGCCGGAAAACCCCCAGCAGTGATTAAGGCCATTATCAGCACCCATATCATCCTCGACTACTATGATGAGAAGAAGCTCGTTGAAGTTCACCCCAGCCACCCACAGTTGACCACCCTCTTCCAGTCCACAGGCCTCGCCGTCAAGCAACAAGGCTTCCTCAACGTTTCACTCATCGGCGAGGGCGAAATCGCCTTCAGTCCCGCCGGCACTTCCGACTACTCCGAACTCGTCAAGACCGTCGTCACTGAGCCCTACAACATCTCCGTTCTTCAAATCGCCAAGCCCATCATCGCCCCAGGCATCGACAATGAAACCCAACTTGCACAGCCACCACAAGCAGCTAAAGCCTCTCCCCCCACCGGAACCGCCAAGGCACCAGCTCCCTCCAAAGACAGTGCCAAAACACCCGCTCCCTCGACACAGAGTGCCAAAGCACCTGCACCTAGTGGTGCCAAGGCACCCGCACCTGCATCGAAGGGTGGTGCCAAGGCACCAGCTCCTGCAGGAGATGCAAAATCTCCTTCCCCAACTACTACTGAGGCACCGGCTCCTTCGGATACTGCGGCCGCACCTTCACCTGCCGAGTCTCATGCCCCAGTAGCTGCTGACGCCCCAGCAGCAGATGGTCCCGCTGCTGATGATGGTGATGCTGCAGATACTGCAAGCAGCTCCTCCATCATTAAGATGAGCTTGGTTGGATCAGTGATGGCCTTCGCTTCACTCTTGATCGTTTTATAA 951 0.5394 MSFKSCSLLCIAILLALSSAIDGFNITELLEKYPDLSSFNRYITEAKLADQINSRNTITVLAVENGAISSIAGKPPAVIKAIISTHIILDYYDEKKLVEVHPSHPQLTTLFQSTGLAVKQQGFLNVSLIGEGEIAFSPAGTSDYSELVKTVVTEPYNISVLQIAKPIIAPGIDNETQLAQPPQAAKASPPTGTAKAPAPSKDSAKTPAPSTQSAKAPAPSGAKAPAPASKGGAKAPAPAGDAKSPSPTTTEAPAPSDTAAAPSPAESHAPVAADAPAADGPAADDGDAADTASSSSIIKMSLVGSVMAFASLLIVL 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00887 316 SUPERFAMILY FAS1 domain 30 169 IPR036378 -
Viun8g00887 316 FunFam Fasciclin-like arabinogalactan protein 3 23 167 - -
Viun8g00887 316 MobiDBLite consensus disorder prediction 178 293 - -
Viun8g00887 316 Gene3D FAS1 domain 24 154 IPR036378 -
Viun8g00887 316 ProSiteProfiles FAS1/BIgH3 domain profile. 23 148 IPR000782 -
Viun8g00887 316 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 6 174 IPR033254 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00887 Viun-Chr8 8693733 8695064 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00887 - - vun:114195537 442.195
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00887 8 8693733 8695064 Viun8g00887 8 8693733 8695064 ECH