Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00876 ATGGCGAAGCTTTGCAAAATATCATCCTCACTCTTCCTTTCACTATCCCTCAAACCGAAACTCATCTACCGCACCAATGCCTTTCTGCTTTCTCGTTCAACCGCCACCACCTCAAACCACAAGATACAGAATGCAAAAGCAGGCTTGGCCAAAGAAAAGCGCAGAACACGCTCCGACAAACACTTCAACCCAGACGCCATAATTCACCATTGCAACGTTAACCACTCCGACATCGACACCGCCACCAAGTTCTCGCACATTCCGGTCATGCTGGGCGAAGTCATGGACGTCTTCTCCGCCGCTTCCTTAACCTCCTTCGTCGATTGCACCCTCGGCGCTGCCGGTCACTCCACCGCCGTGATCAAGGGTCATCCTGAGATGAAGTTTTTCGTGGGGATGGATGTGGATTCTGCTGCACACGACATTGCCCAACCACGCCTTGATGCCGTCTTAAGTGGTGATGTCAAAGCTTTTACAGTTTTGAGGAATTTTAGGGATGTGAAGTCTGTGCTTAGAGAAATCTCAGACTTACACATGGGTGTTGATGGGATCTTAATGGACTTGGGAATGTCATCTATGCAGGTAGACAATCCTGCAAGAGGATTCAGTGTGCTCAGTGATGGACCCCTTGATATGCGGATGGATCCTCAGGCAAGTCTTAAAGCAGAGGACATATTAAATTCCTGGCCAGATTCTGAAGTGGGTCGTATCCTAAGAGAATATGGAGAAGAAAGTAATTGGCGAACCCTGCAAAAGAAAATTGTCAATGCCCGATTACACGGTGGATTTCACTCTACCACTGATTTGCTAGATCTTATCAAGCGTGTGACTCCTCCAATGAAAGGTGGAAGACAAGGTTGGATAAAAACAGCAACACGGGTTTTTCAAGCTCTGAGAATTGCTGTTAATGATGAACTGAAGACACTTGAGGATTCCCTCTATTCTTGTTTTGATTGCCTTGCACCAAGGGGTAGACTTGCTGTCATATCTTTTCACAGTCTTGAAGACAGAATTGTGAAGCAGACATTTCTTAATATAGTCAAAGGAGGCGAAGATATGGAAGAAAGGGAGAGCCTGAACAGTGATTTGAGGAAGACTAGTGATGAAATCAAAGAAAAAGAAGCATGGATAAAGCAAGTAATACATGGTTCAAATGGAACAATTCTCACAAAAAGACCAATCACACCATCTGGAGAAGAAGAAAAATTGAACCGCAGAAGTAGAAGTGCAAAGCTCAGGGTTATTCAGAAGCACTGA 1257 0.4519 MAKLCKISSSLFLSLSLKPKLIYRTNAFLLSRSTATTSNHKIQNAKAGLAKEKRRTRSDKHFNPDAIIHHCNVNHSDIDTATKFSHIPVMLGEVMDVFSAASLTSFVDCTLGAAGHSTAVIKGHPEMKFFVGMDVDSAAHDIAQPRLDAVLSGDVKAFTVLRNFRDVKSVLREISDLHMGVDGILMDLGMSSMQVDNPARGFSVLSDGPLDMRMDPQASLKAEDILNSWPDSEVGRILREYGEESNWRTLQKKIVNARLHGGFHSTTDLLDLIKRVTPPMKGGRQGWIKTATRVFQALRIAVNDELKTLEDSLYSCFDCLAPRGRLAVISFHSLEDRIVKQTFLNIVKGGEDMEERESLNSDLRKTSDEIKEKEAWIKQVIHGSNGTILTKRPITPSGEEEKLNRRSRSAKLRVIQKH 418
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00876 418 Gene3D Putative methyltransferase TM0872, insert domain 198 305 IPR023397 GO:0008168
Viun8g00876 418 SUPERFAMILY Putative methyltransferase TM0872, insert domain 200 303 IPR023397 GO:0008168
Viun8g00876 418 PANTHER S-ADENOSYL-METHYLTRANSFERASE MRAW 82 417 IPR002903 GO:0008168
Viun8g00876 418 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 86 417 IPR029063 -
Viun8g00876 418 FunFam Ribosomal RNA small subunit methyltransferase H 198 305 - -
Viun8g00876 418 Hamap Ribosomal RNA small subunit methyltransferase H [rsmH]. 86 418 IPR002903 GO:0008168
Viun8g00876 418 Pfam MraW methylase family 84 417 IPR002903 GO:0008168
Viun8g00876 418 NCBIfam 16S rRNA (cytosine(1402)-N(4))-methyltransferase RsmH 83 417 IPR002903 GO:0008168
Viun8g00876 418 Gene3D Vaccinia Virus protein VP39 86 415 IPR029063 -
Viun8g00876 418 MobiDBLite consensus disorder prediction 388 418 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00876 K03438 - gmx:100803819 686.411