Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00863 ATGGAGGAGCAATTCATACTTAGAGTTCCACCGAATGTGGCAGAGCGGATAGAGCGGCTTTTGAATGAAACTGATCCTTCTTCATCTGAAGACAAGTCATTAGATTTGTCATTTAGTGAGGATGGAAGAAGTGGTACGTTTATGATTGGGAATGAACACTTCCCAGCTTCTCTATTGGACCTTCCTTGTGTTGTTGAATCCTACAAGACATATGATGATAACTCTTTGATTAAGACAGCTGATATTGGTCAGATGATTATGGTTCGGGAATCCGGTGATGCTGCTCCAGATGTAATTGAGTACAGGCATGGCCTCACCCCGCCCATGAGAGATGCTCGCAAGCGTAGATTTCGCAGGGAGCCAGATCTTAATCCTGAGCTTGTGTCCCGTGTTGAGAAAGATCTCCTCAAAATCATGGCTCGAGGAACAGCTGAAAATCTTGATGCAGAAGCCGCTGAACAAGAAGTGGAGGAGAATGCTCGAGGTGGTAATAAAAAAGCTGCACCTAAGCCTGCACCAAAACATGATGTTCCAGAGAATCATACGAATGCAGGGGAGCCTGACAGGAGTGATTCTGAGGAATCTGATGACTCGGTCTGA 600 0.455 MEEQFILRVPPNVAERIERLLNETDPSSSEDKSLDLSFSEDGRSGTFMIGNEHFPASLLDLPCVVESYKTYDDNSLIKTADIGQMIMVRESGDAAPDVIEYRHGLTPPMRDARKRRFRREPDLNPELVSRVEKDLLKIMARGTAENLDAEAAEQEVEENARGGNKKAAPKPAPKHDVPENHTNAGEPDRSDSEESDDSV 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00863 199 CDD TAF7 2 145 IPR006751 GO:0005669|GO:0006367
Viun8g00863 199 MobiDBLite consensus disorder prediction 154 189 - -
Viun8g00863 199 MobiDBLite consensus disorder prediction 147 199 - -
Viun8g00863 199 Pfam TAFII55 protein conserved region 1 140 IPR006751 GO:0005669|GO:0006367
Viun8g00863 199 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED 1 193 IPR037817 GO:0005669
Viun8g00863 199 SMART TAFII55_N_2 1 146 IPR006751 GO:0005669|GO:0006367
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00863 Viun-Chr8 8225776 8227983 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00863 K03132 - gmx:100782843 314.694