Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00862 ATGCGAGGGATGAAGCTTGGAAGGTGGCTCACAAGTGTTTTGTTCCTCATTGTTGCCACAGTGAACAATGCAGTAGGTGCATTTGTGGGGGTAAACATTGGCACTGGTGTTACTGATCTTCCATCTGCTTCAAATCTGGTTGCTATTCTGACAGCACATCAAATTACACATGTGCGTCTGTATGATGCCAATGAGCACATGCTACAAGCACTTTCAAAAACTGGAATTGAAGTAATTGTTAGTGTCACAGATGAAGAGATACTAGGCATTGGAAAATCTGCATCAGTTGCTGCAGCATGGATTAGTAACAATGTGGCTGCATACATGCCATTTACTAATATCACAGCAATATCAGTAGGTAGTGAGGTTCTCACCTCAGTCCCAAAAGTTGCATCTGTTCTTGTTCCTGCCATGAACCATCTGCACAAAGCACTTGTTGCTTCAAACCTTAACTTTAGGGTTAAGATTTCAACGCCACAGTCCATGGATATAATTTCCAGGCCTTTTCCTCCTTCCACGGCCACCTTTAACTCCTCATGGAACTCCACAATCTACCAGCTCCTTCAGTTTTTGCAGAACACAAATTCCTCTTACATGTTAAATGCCTACCCTTATTATGGATACACTAAAGGAGATGGCATTTTCCCTATTGAATATGCTCTGTTCAGACCCCTTTCTCCAGTGAAGCAAATTGTTGATCCAAACACACTGTTCCATTACAATAGCATGTTTGAGGCTATGGTGGATGCCACCTATTATGCCATAGAAGCCTTCAATTTCAATAATATACCAATTGTTATCACAGAAACTGGTTGGCCTAGTTTTGGTGCAGTAAATGAACCAGATGCTACTGAAAAGAATGCTGAGACCTACAATAATAATTTAATTCTGAGAGTACTTAATGGTTCAGGACCCCCTAGTCAGCCAAAGATAGCCCTTAATACCTACCTATATGAGTTATTTAATGAAGACAAGAGAAAAGGGCCTGTATCAGAAAAGAATTGGGGTGTTTTTTATGCTAATGGAAGTAGTGTTTATCCCTTGAGTTTTAGTGGTTCCAACCTGAGTAATGGAAATTCTCTAGGATCGTTTTGTGTGGCTAAAGATGATTCTGACACTGACAAATTGCAAGCTGGCTTGAGCTGGGCTTGTGGACAAGGCCAAGCTAACTGTGTAGCTATCCAACCAGGAAGACCATGCTATTCCCCCAATAACGTCAAAAGCCATGCCTCTTATGCTTATAATGATTATTATCAGAAAATGCATAATGCTGGTGGCACTTGTGACTTTGATGGTACAGCAACAACAACAACTGAGGATCCTAGTTACGGGTCCTGTATATATGCGGGAAGTGCTAACTCGAGCATTGGTGGAAGAAGTTCATCTTCTACAGCAATTGGACTTGGACCTATAAGTCCTGTTGGAGTTGGAGCTGGTTTGAACCTGCAAGTGTCCACCTTTCAGTATTTGATATCGTCTATTAGTGTTCTTTCTGCTTTAATGATGTCATGA 1512 0.4127 MRGMKLGRWLTSVLFLIVATVNNAVGAFVGVNIGTGVTDLPSASNLVAILTAHQITHVRLYDANEHMLQALSKTGIEVIVSVTDEEILGIGKSASVAAAWISNNVAAYMPFTNITAISVGSEVLTSVPKVASVLVPAMNHLHKALVASNLNFRVKISTPQSMDIISRPFPPSTATFNSSWNSTIYQLLQFLQNTNSSYMLNAYPYYGYTKGDGIFPIEYALFRPLSPVKQIVDPNTLFHYNSMFEAMVDATYYAIEAFNFNNIPIVITETGWPSFGAVNEPDATEKNAETYNNNLILRVLNGSGPPSQPKIALNTYLYELFNEDKRKGPVSEKNWGVFYANGSSVYPLSFSGSNLSNGNSLGSFCVAKDDSDTDKLQAGLSWACGQGQANCVAIQPGRPCYSPNNVKSHASYAYNDYYQKMHNAGGTCDFDGTATTTTEDPSYGSCIYAGSANSSIGGRSSSSTAIGLGPISPVGVGAGLNLQVSTFQYLISSISVLSALMMS 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00862 503 SUPERFAMILY (Trans)glycosidases 29 350 IPR017853 -
Viun8g00862 503 Pfam X8 domain 364 435 IPR012946 -
Viun8g00862 503 FunFam Glucan endo-1,3-beta-glucosidase 3 28 353 - -
Viun8g00862 503 Gene3D Glycosidases 28 356 - -
Viun8g00862 503 Gene3D - 359 456 - -
Viun8g00862 503 FunFam Glucan endo-1,3-beta-glucosidase 4 359 452 - -
Viun8g00862 503 SMART X8_cls 363 448 IPR012946 -
Viun8g00862 503 Pfam Glycosyl hydrolases family 17 29 350 IPR000490 GO:0004553|GO:0005975
Viun8g00862 503 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 18 437 IPR044965 GO:0004553|GO:0005975
Viun8g00862 503 ProSitePatterns Glycosyl hydrolases family 17 signature. 263 276 IPR000490 GO:0004553|GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00862 Viun-Chr8 8222714 8225582 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00862 4 475 Glycoside Hydrolase AT3G13560 64.421 0.0 637
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00862 K19892 - gmx:100786558 877.47