Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00822 ATGGGTTGGAAAGCTGCTGAAAAACTCATTAGGCACTGGAAAGTTGTCAGAGGGGATAATGTTATGATAATAAGAGGCAAAGATAAGGGTGAGACTGGGACTATTAAGCGTGTTATTCGCTCTCAGAATCGTGTCATTGTTGAGGGTAAAAATCTGGTGAAGAAGCATATTAAGCAAGGGCAAGGTCATGAAGGGGGAATCTTTGCAGTCGAAGCCCCACTCCATGCCTCCAACGTGCAAGTTCTTGACCCAGTAACGGGGAAGCCTTGCAAAGTTGGAGTTAAATATCTTGAAGATGGTACTAAAGTCAGAGTATCGAGAGGAATAGGAGCATCTGGGTCTATAATCCCTCGTCCTGAGATCTTAAAGATACGAACTACCCCAAGACCTACTGTCCTTGGTCCTAAAGATACTCCAATGGATCTTGTGCTAGAGAAGACTTACGATGCTAAAACAGGAAGGGGAATGCCTGAGCTTTAA 480 0.4417 MGWKAAEKLIRHWKVVRGDNVMIIRGKDKGETGTIKRVIRSQNRVIVEGKNLVKKHIKQGQGHEGGIFAVEAPLHASNVQVLDPVTGKPCKVGVKYLEDGTKVRVSRGIGASGSIIPRPEILKIRTTPRPTVLGPKDTPMDLVLEKTYDAKTGRGMPEL 159
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00822 159 SUPERFAMILY Translation proteins SH3-like domain 10 108 IPR008991 -
Viun8g00822 159 Hamap 50S ribosomal protein L24 [rplX]. 13 107 IPR003256 GO:0003735|GO:0005840|GO:0006412
Viun8g00822 159 SMART kow_9 14 41 IPR005824 -
Viun8g00822 159 Pfam Ribosomal proteins 50S L24/mitochondrial 39S L24 51 108 IPR003256 GO:0003735|GO:0005840|GO:0006412
Viun8g00822 159 Pfam KOW motif 17 48 IPR005824 -
Viun8g00822 159 NCBIfam 50S ribosomal protein L24 14 107 IPR003256 GO:0003735|GO:0005840|GO:0006412
Viun8g00822 159 CDD KOW_RPL26 18 81 IPR041988 GO:0003723
Viun8g00822 159 Gene3D - 4 111 IPR014722 -
Viun8g00822 159 ProSitePatterns Ribosomal protein L24 signature. 18 35 IPR005825 GO:0003735|GO:0005840|GO:0006412
Viun8g00822 159 PANTHER MITOCHONDRIAL RIBOSOMAL PROTEIN L24 3 149 IPR003256 GO:0003735|GO:0005840|GO:0006412
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00822 Viun-Chr8 7333217 7338283 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00822 K02895 - gmx:100499816 311.612