Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00820 ATGCGACGCACTCCTCCCTCCCTCCATTTCCTCGCCGCCACTGACACCGCCACAGCCACGGCCACGGCCACCGCCTCCAACACAGGAGCAGCCAGCGCCGCCTCGATGTCTTCACGCCCACTCCATCGAGGGCGCGGTAGGGGATTCTACGGCCGCCCGTACTCCGGCGGCAGGGGAAACTTCATCTCCGGCGATGCGCACTTACGCTCTGTCCGCGACGCCAATTTAGGACTCCGGCGAGGTGAGAGCGGAAGCTTCGCGAACCAAACGCCGCATAATCAGAATCCTCCGTATAATCCGAGGCCTCATCCGCCGCTTCACCAAGACCGGCCTCAGTTCCGTAATCGACCGTATTCCCCGCACTTTCCGCAACATTTCCCGCAGTATCGGCAACATCCTCCGCCTGAGAACCGGCCGACGTTTCGTCCGCAGACGCATCTCCGGCAGCGGCCGCCGGATTATCGGGACTGGGAGCTTGCCCTGACGCCGCCTCTTCCTCATTGTGAGCGGTTTAAAGTTCTTTCCTATAATATATTGGCTGACTACCTTGCTTTGGACCACCGGAACAAACTTTATTTTCACATACCTCCATACATTTTGGACTGGCAGTGGAGAAAGAGAAGCATACTTTTTGAGTTGGGGCTGTGGTCAGCTGATATCTTGTGTTTACAGGAGGTTGATAAATTTCATGAGTTGGCAGAGGAGTTGAAGCCTAAGGGATACTGTGGCATCTGGAAGATGCGTACAGGTAATCCAGTTGATGGCTGTGCAATATTTTGGCAAAAATCAAGGTTCAATTTGTTATACGAAGAATGCATTGAGTTTAATAAGCTGGGACTCAGGGACAATGTCGCTCAGCTATGTGTACTAGAGATCATTAATAGAAATGGATCTTTCCCATCCAGCTTGACAGGCTCTAGTAAAGTTGTGGTTTGTAACATTCATGTGCTTTACAATCCTAACAGGGGAGAAATTAAGCTTGGCCAGGTTCGAGTGCTACTTGATAAGGCTAAAGCTGTTTCTAAACTCTGGAATGATGCCCCTATAGTTATCTGTGGGGATTTTAATTGTACACCCAAGAGTCCGTTATACAACTTTATATCGGAACAGAAGCTAGATCTGTCCGGAATAGATAGGAATAAGGTATCAGGACAAGCTTCTGCAATTCGTGCATCAAAGCCCTATTATGGTCCTAATTCTGGTGAAATATCTACTACTGGTTCAGTTCAGGTCATATCCACTGAAGGTGTCAAGGAAGTTATTGAACAAAATAATTGTCGATTGGACACAACAAAACTGGACACTAAATGTCATAGTTTGGATAATCAGCATACTCACTCAGTTTTGGATAGATCTGTTGAGTCTTGTGCAAATGTTGAGTGTGGAAAGGAAAATGATTCATATGCAGGAAAAGATACTCAGGAAACTGCTGTTGACCATTCAAAGATCTTTTGTGAAGTTGGTAGCATAAAAGAACAAGATCCTTCTTATAGTAAAGGTGGTGTCCATATTGTTCCTGTAAATGGTGATATTCATGACATTACACCTGTGATCTCTTCAGCTCCTGAAGCTGTTAACAGTGAAAAAACTGGGATGGGAAGCAATGAACATATACAAGATGCTGTCCCAACTTCAAATGAAGAATTAAGTAAAGAATCCAACTTACATGTCCCTGAAGAGAATAAACTGGTGGAGTTTGAATTTTCCTCAACTTCTCTTCAGGAATATCATCAATCTTTCACAAGGGTGAGCATTGATGATGAGTCAACAGATCTAGACAATAGCGTAATTTCTCCAACTAAACCATCGAGCCAAACTTCAGCTTCCAATACATTTGAAGTCCCTAGTACAGAGTATGGAGATAGCCCATCTCCTGAGGAAATTGCTGATGACCAAAATAACAGCTCATCAACCGCATTCCTGGTTGATAAATCTCATCAATTGTCCAACATTAACTTTCCACTTGATGAAAAAGAGAAAACATTCTTTGATGAGATAGATAAAACTATCGCAGTCGGCAAAAATATTGGTGATGACAGGAGTTTTGTATCTTCCTTACATAATGCTGAAGGAGTTGCTCTTGACATCAGTTCATCAATGAAATCAGATCTTGATAAGTCCTATCAGTACAATAAATTAAATTCTTCTTCCAACTTGGTGCCTGTAGAAGGCAATGAAGGTGAAGATAACTTGTCTCCTCGTCAGATTTCTAAATCTATTTGGGCAGAGGAGGCTACTTATAATCCAGCATTGTGGACCCCTAAGGAGATAGAAACTGCAACAGGAAATGAAGATTGCACCTTCTTGGAGCACCCTTTACAGCTTAGGAGCACATACACCGAGGCTACGGATTGTTCAGGGACCAGAGACCCTTACGGAGAGCCCCTTGTGACCAGTTATAATAGGCGCTTCTCAGGAACTGTTGACTACATTTGGCGATCTGAAGGTCTTCAAACAACCAGAGTTCTTGCTCCAATGGCTAAACATGCCATGGAATGGACTCCAGGATTCCCAACGAAGAAATGGGGCAGTGATCATATTGCATTGGTGACGGAGCTGGCTTTCCTGAAAGATGGTACCGACATCTCCACCAAGGTTTAA 2601 0.4483 MRRTPPSLHFLAATDTATATATATASNTGAASAASMSSRPLHRGRGRGFYGRPYSGGRGNFISGDAHLRSVRDANLGLRRGESGSFANQTPHNQNPPYNPRPHPPLHQDRPQFRNRPYSPHFPQHFPQYRQHPPPENRPTFRPQTHLRQRPPDYRDWELALTPPLPHCERFKVLSYNILADYLALDHRNKLYFHIPPYILDWQWRKRSILFELGLWSADILCLQEVDKFHELAEELKPKGYCGIWKMRTGNPVDGCAIFWQKSRFNLLYEECIEFNKLGLRDNVAQLCVLEIINRNGSFPSSLTGSSKVVVCNIHVLYNPNRGEIKLGQVRVLLDKAKAVSKLWNDAPIVICGDFNCTPKSPLYNFISEQKLDLSGIDRNKVSGQASAIRASKPYYGPNSGEISTTGSVQVISTEGVKEVIEQNNCRLDTTKLDTKCHSLDNQHTHSVLDRSVESCANVECGKENDSYAGKDTQETAVDHSKIFCEVGSIKEQDPSYSKGGVHIVPVNGDIHDITPVISSAPEAVNSEKTGMGSNEHIQDAVPTSNEELSKESNLHVPEENKLVEFEFSSTSLQEYHQSFTRVSIDDESTDLDNSVISPTKPSSQTSASNTFEVPSTEYGDSPSPEEIADDQNNSSSTAFLVDKSHQLSNINFPLDEKEKTFFDEIDKTIAVGKNIGDDRSFVSSLHNAEGVALDISSSMKSDLDKSYQYNKLNSSSNLVPVEGNEGEDNLSPRQISKSIWAEEATYNPALWTPKEIETATGNEDCTFLEHPLQLRSTYTEATDCSGTRDPYGEPLVTSYNRRFSGTVDYIWRSEGLQTTRVLAPMAKHAMEWTPGFPTKKWGSDHIALVTELAFLKDGTDISTKV 866
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00820 866 Gene3D Endonuclease/exonuclease/phosphatase 144 448 IPR036691 -
Viun8g00820 866 Gene3D Endonuclease/exonuclease/phosphatase 701 864 IPR036691 -
Viun8g00820 866 MobiDBLite consensus disorder prediction 526 551 - -
Viun8g00820 866 MobiDBLite consensus disorder prediction 23 54 - -
Viun8g00820 866 MobiDBLite consensus disorder prediction 589 634 - -
Viun8g00820 866 SUPERFAMILY DNase I-like 162 373 IPR036691 -
Viun8g00820 866 MobiDBLite consensus disorder prediction 526 556 - -
Viun8g00820 866 MobiDBLite consensus disorder prediction 80 149 - -
Viun8g00820 866 Pfam Endonuclease/Exonuclease/phosphatase family 174 375 IPR005135 GO:0003824
Viun8g00820 866 PANTHER CARBON CATABOLITE REPRESSOR PROTEIN 4 110 855 - -
Viun8g00820 866 MobiDBLite consensus disorder prediction 590 618 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00820 Viun-Chr8 7270388 7285075 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00820 199 370 EF-hand Containing Proteins AT5G54130 28.415 1.94e-08 55.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00820 - - vun:114194208 1708.73