Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00789 ATGAGAAGAATATGGAATCTTCTCTCCAAATCCAAACAACTCGCGGCGTTTTCAAGCTCAGCCTCCAAATTCCGCGTCACTGCGTTTCGCTCTTATTGCGATCAATCGAATCGGCAGAACCTTCCAGGCCCGCTTGTTCAGTACAAAAGTCTAGTTGATCAAGGGAAATTGCAGTATGATCCTTACCAAGAGAGTGTTGCTTCAGAGCTTGAGAGTTTGCTTGCCAGGTTGGAGCAGTATGAGAAAGATATGGAGGAGTATCATGTGAATCTAGCTAATTGGGAGAAGCAGCGGGAGAATGAGCGGCGGAGACTTCTTATGGAGGAAGTTGAGCTGCACCAGAAGGATGAGGACTGGTGGAAGCGGTTGAACAATAAGCTTACTGAAAGATGGGCATCCCGGAAAAGACCTGCGAATATGGAGTCAGGGGTGGGGAAATGGGTATCGTATCTTAAACGTGAGAAGAAGTTGGATTCACTTGTTGGTCGTCGTCCAACTGCTCCTCCAGCTCCTAAAGGACTTTACATATATGGCAATGTTGGCAGCGGGAAGACAATGTTGATGGACATGTTCTATAGTTCTACTAAAGGAATTGTAAAACATCGAAAAAGGTATCACTTTCATGAGGCCATGCTCAGAATTAATGAACATATGCACAAGATATGGAAGAGCCAAATGGAAGAGAAGCCTTTGCAATCGACTGTTGCTGGTTGGATTATGAGTCTTCCATTTGACATGAAAGCTAAGGAGTGGTTGGCTGCAGAGGAAAGATACAAGCAAGATATGCAAATAAAGAACATTCTTCCAGCTGTAGCGGATAAGTTTTTCCTAGATGGAGAAGAAAATGAAAAAGGAGCTAGCATTTTGTGCTTTGATGAGATACAGACCGTTGATGTATTTGCTATTGTGGCTTTATCTGGAATTCTAAGCAGATTGCTGAGCAGTGGAACTATAATTGTGGCTACCAGTAATCGAGCACCAAGCGACTTAAATGAGGCTGGTATGCAAAAGGAAATATTTCAGAAACTTGTCTCCAAATTGGAAGACCATTGTGAGAAGGTATTGATAGGGAGTGAAATTGACTACCGTCGTTTTATAGCACAAAAATCAGAAAACCAGGTGCACTTTTTGTGGCCTATCGAAAAGGAAGCAATCAATGAATTTGAGAAAAAGTGGCATGATGTAACAAGCAGATTGGGAGGAAGAATAGTTTCTAATACCACCATCTCAGTGATGTTTGGAAGGACACTTGAGGTTCCCGAAAGCGTTGATGGAGTTGCACGCTTTACATTTGAATATCTCTGTGGTCGTCCGTTGGGTGCTGCAGATTATATTGCAGTTGCTGAAAACTTTCACACTGTTTTCATATCTGATATTCCAGTAATGAGTATGCGCATCCGTGACAAGGCACGGAGATTTATTACCCTTATTGATGAGTTATACAATCATCATTGCTGTCTATGTTGTTTGGCATCCTCTTCAATTGATGAATTATTTCAAGGAACTGAGGAGGGCACACTTTTTGACTTAGAAAGTTTCCAGTTCGAAACAGAGATCGATGGTGGGAAACTTCGTCGCAATGTCTTGGCAGAAGGCAGGGTGAGCTCAGCAGGTGCCCCTTCTAGTATCACATCCATACTATCTGGTCAAGAAGAGTTGTTTGCTTTTCACAGAGCTGTCTCGCGGCTGATTGAAATGCAAACTCCATTATACTTGGATGGAGTAAGTAATTTCCACCCCTATTTTCAGAGGATATATAAACAGTCACAACAATTGTGA 1779 0.4244 MRRIWNLLSKSKQLAAFSSSASKFRVTAFRSYCDQSNRQNLPGPLVQYKSLVDQGKLQYDPYQESVASELESLLARLEQYEKDMEEYHVNLANWEKQRENERRRLLMEEVELHQKDEDWWKRLNNKLTERWASRKRPANMESGVGKWVSYLKREKKLDSLVGRRPTAPPAPKGLYIYGNVGSGKTMLMDMFYSSTKGIVKHRKRYHFHEAMLRINEHMHKIWKSQMEEKPLQSTVAGWIMSLPFDMKAKEWLAAEERYKQDMQIKNILPAVADKFFLDGEENEKGASILCFDEIQTVDVFAIVALSGILSRLLSSGTIIVATSNRAPSDLNEAGMQKEIFQKLVSKLEDHCEKVLIGSEIDYRRFIAQKSENQVHFLWPIEKEAINEFEKKWHDVTSRLGGRIVSNTTISVMFGRTLEVPESVDGVARFTFEYLCGRPLGAADYIAVAENFHTVFISDIPVMSMRIRDKARRFITLIDELYNHHCCLCCLASSSIDELFQGTEEGTLFDLESFQFETEIDGGKLRRNVLAEGRVSSAGAPSSITSILSGQEELFAFHRAVSRLIEMQTPLYLDGVSNFHPYFQRIYKQSQQL 592
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00789 592 Coils Coil 63 116 - -
Viun8g00789 592 FunFam AFG1-like ATPase isoform C 163 364 - -
Viun8g00789 592 Pfam AFG1-like ATPase 155 503 IPR005654 GO:0005524|GO:0016887
Viun8g00789 592 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 354 IPR027417 -
Viun8g00789 592 NCBIfam cell division protein ZapE 283 504 IPR005654 GO:0005524|GO:0016887
Viun8g00789 592 Gene3D - 163 364 IPR027417 -
Viun8g00789 592 PANTHER ATPASE N2B 23 573 IPR005654 GO:0005524|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00789 Viun-Chr8 6934456 6953368 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00789 - - mtr:11431777 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00789 8 6934456 6953368 Viun8g00789 8 6934456 6953368 ECH