Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00770 ATGTCCCACCACCACCACCACCAAACCACCCTCATGCTGCCCAATCCCACCACCCCTAGCCGCTCTTCCTCCGCCTCCTCCTCCCCCCTCCCCCTCATCCACGCCATCTTCGCCAGAAAAAACCTCTTCTACCACCGCCTTCCCTCCCTACCCCTCCGACTCTCCGTCCTCAAACTCGACGGTTCCTCCTTCCATATTCAGGTTTCCAAGACCGCCACTATTGCCGAACTCAAAGACGCAGTCGAGGCTGTCTTCGCCCACGCGCCTCTCAAGGGTCCCGCCAAAATTTCATGGGCGCATGTTTGGGGGCAGTTTTGCCTATGCTATGATGGACAGAAGCTAGTTACCGAGAATGATTATCTTCGCAACTATGGCATCAAGGATGGGGATCAGCTTCGTTTCATCCGCCATGTTTCAAACAATTGCTGTGTCCAAAGAAAGCGGTTGAAGAAAAGAATTGTCTATTTGAAACAGCAGAGGAGGTCTTCTCCAGTGGATAGCTATGAAGACAAAGGAAAGTGTGATAATGATGAGATTGGTTCTGACGATGAAGCCACGGATAATGAGAAGCATGAGACTGAAGAAGTAGAAGAAGAGCGTGTGGTAAAGAACAAATTTGCCGGCTTTGTGGGAGAGTTGTTCTCTTACACTCCACTAGCAGTTGTGAGAAGAACTACAACTAAAAGCAGGATTTGGCCATCAACTATTCCCAGATGTTTGGTGGGTAGTTTTAGAAAGATTAGAAGTATTGTATGCTTTGGCAAGAGGAGGCCCTATTCTCGGAGACTTACATGGAGACATATGGGTTAA 810 0.4889 MSHHHHHQTTLMLPNPTTPSRSSSASSSPLPLIHAIFARKNLFYHRLPSLPLRLSVLKLDGSSFHIQVSKTATIAELKDAVEAVFAHAPLKGPAKISWAHVWGQFCLCYDGQKLVTENDYLRNYGIKDGDQLRFIRHVSNNCCVQRKRLKKRIVYLKQQRRSSPVDSYEDKGKCDNDEIGSDDEATDNEKHETEEVEEERVVKNKFAGFVGELFSYTPLAVVRRTTTKSRIWPSTIPRCLVGSFRKIRSIVCFGKRRPYSRRLTWRHMG 269
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00770 269 CDD Ubl_SNRNP25 52 137 IPR040610 -
Viun8g00770 269 MobiDBLite consensus disorder prediction 1 26 - -
Viun8g00770 269 MobiDBLite consensus disorder prediction 7 26 - -
Viun8g00770 269 Pfam Ubiquitin-like domain 52 138 IPR040610 -
Viun8g00770 269 MobiDBLite consensus disorder prediction 164 197 - -
Viun8g00770 269 Gene3D - 49 145 - -
Viun8g00770 269 SUPERFAMILY Ubiquitin-like 51 143 IPR029071 -
Viun8g00770 269 PANTHER U11/U12 SMALL NUCLEAR RIBONUCLEOPROTEIN 25 KDA PROTEIN 20 251 IPR039690 GO:0000398|GO:0005689
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00770 Viun-Chr8 6710012 6713200 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00770 - - gmx:100820296 385.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00770 8 6710012 6713200 Viun8g00770 8 6710012 6713200 ECH
Viun9g03095 9 38467141 38468116 Viun8g00770 8 6710012 6713200 ECH
Viun8g00770 8 6710012 6713200 Viun9g03095 9 38467141 38468116 PCT