Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00761 ATGAATAACAGCGTTTGTTGGCCTTACTTTGATCCTGACTTTGATACTCTCCCAGAAAGAATATATGGTCCACCTTGCCGAGTCTGCATCGACAATGACAGCATGAAGGGTTGCACAGTAGTGAAGGTAGATAGTGTTAACAAGGAGGGTCTCCTACTAGAAGTGGTGCAAGTTTTGACAGACATGAACCTTCAGATCTGCAAAAGCTATATTTCATGTGATGCTGGTTGGTTCATGGATGTGTTTCATGTTAGAGACGAAAATGGCAACAAACTAACGGATCAGAAAGTCATCAACGAAATCCAACAGGCCCTAGGAAAATCAAGAGCCTCTCCACCATCACAACAATACAGCAACAACGTCAATTCAGTAATCACAACAATGACCAACTACAAGACCTATTCCAAGAAATTCATCCCTTTACTTTCTAACTCAACTGAACACTACACAGCAATTGAAATGACCGGCACCGATCGTCCCGGATTATTTTCCGAGATCTCGGCAGCGTTGGTAGATCTCCATTGCAACATAGTTGAGGTCCACGCATGGAGTCACAATGCGCGACTCGCATGCGTGGCTTACATATCAGATCAATCTACCGACTCTGCCATTGAAGATCCTTCTCGTTTGTCATCAATAGAGGATCACTTGACAACTGTGTTGCGTGCCACCACCAATCCTAACGGTGGTGGCACAGGCACTTGTCCCGATGTCAAGACCTCGGAATTTTTGGGAGGAGAAGGGAACATGACTAGTGTGGAACGGAGGTTGCACCAGCTTATGCTCTCAGTTAGGGACTTTGAGGCTCCCTCTTCTCCGAAAGAGATGAAGGGGAGGAAAAGAATGGTGACAATTGAAAGTTGTGAACAAAAGGGGTATTCAATTGTGAACATTGAGTGTAAGGATCGTCCCAGGCTCATGTTTGACACCGTTTGCACGTTAACAGACATGCAGTACGTGATTTTTCATGCTTCCATCAGTTCCCATGGAGGCTATGCATTTCAGGAATATTTTATTAGGCACGTAGATGGATATGCTTTAGATACGGCAAGTGAGAAGGAACGAGTAATAAAATGCTTAGAGGCAGCCATAGAACGCCGGGTTTGTGAGGGAGTTAGGCTAGAGTTGTGTGCAGAGAATAGAGTAGGGTTACTGTCGGACATAACACGAGTACTGCGAGAGAATGGGCTGGTGGTTGTTCGAGCAGACGTTGAAACGCATGGAGAGAAATCCGTGAACGCTTTCTATGTGAAAGACATTTCAGGGAACGAGGTTGACGTTGAGTACTTCAGCAACTCAGTGAAGAGGGAGATGGGTCCCATCGTCACACTCCATGTCAAGAATGACACCACCAGAAGAAAAACACCCTCTCCTTCTCTCTCCTTTGGAGGCATGCTAAGATCTCGTATCGAACGTCTTTCTCATGGCTTCATTATATGA 1440 0.4535 MNNSVCWPYFDPDFDTLPERIYGPPCRVCIDNDSMKGCTVVKVDSVNKEGLLLEVVQVLTDMNLQICKSYISCDAGWFMDVFHVRDENGNKLTDQKVINEIQQALGKSRASPPSQQYSNNVNSVITTMTNYKTYSKKFIPLLSNSTEHYTAIEMTGTDRPGLFSEISAALVDLHCNIVEVHAWSHNARLACVAYISDQSTDSAIEDPSRLSSIEDHLTTVLRATTNPNGGGTGTCPDVKTSEFLGGEGNMTSVERRLHQLMLSVRDFEAPSSPKEMKGRKRMVTIESCEQKGYSIVNIECKDRPRLMFDTVCTLTDMQYVIFHASISSHGGYAFQEYFIRHVDGYALDTASEKERVIKCLEAAIERRVCEGVRLELCAENRVGLLSDITRVLRENGLVVVRADVETHGEKSVNAFYVKDISGNEVDVEYFSNSVKREMGPIVTLHVKNDTTRRKTPSPSLSFGGMLRSRIERLSHGFII 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00761 479 PANTHER ACT DOMAIN-CONTAINING PROTEIN ACR4-RELATED 24 446 IPR040217 -
Viun8g00761 479 ProSiteProfiles ACT domain profile. 151 231 IPR002912 -
Viun8g00761 479 Pfam ACT domain 373 422 IPR002912 -
Viun8g00761 479 CDD ACT_ACR_1 38 109 - -
Viun8g00761 479 Pfam ACT domain 152 200 - -
Viun8g00761 479 SUPERFAMILY ACT-like 370 422 IPR045865 -
Viun8g00761 479 CDD ACT_ACR_2 150 223 - -
Viun8g00761 479 SUPERFAMILY ACT-like 35 107 IPR045865 -
Viun8g00761 479 CDD ACT_ACR_3 293 367 - -
Viun8g00761 479 Gene3D - 145 225 - -
Viun8g00761 479 ProSiteProfiles ACT domain profile. 373 449 IPR002912 -
Viun8g00761 479 ProSiteProfiles ACT domain profile. 40 115 IPR002912 -
Viun8g00761 479 SUPERFAMILY ACT-like 292 362 IPR045865 -
Viun8g00761 479 SUPERFAMILY ACT-like 146 220 IPR045865 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00761 Viun-Chr8 6536322 6542024 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00761 - - gmx:100820595 842.417
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00761 8 6536322 6542024 Viun8g00761 8 6536322 6542024 ECH