Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00760 ATGGATATTCCACGTAAATATCTCTTCTCTCCGATTCTCGCGCTCATTCTACTTTCTTTCATCGTCGTCGTGGTGCTGCGTCCAGTTCAGTTACTCAAATTCACGACGATCGCTGGTTCAAAACGTGGACATTCCGTTCCTCTGGATCGTCTGCGAATGAAGCTCTCCGGCGAGAATCAACTTCACGCCGTCGTAAGTTCCATCGACCTTCGCCGGAACAAATTCAGTGACAGAACTGCTGCCAGGAAGGTAGGAAAACTAGAACAAACACTCGCGGCGGCGAGAGCTTCGATGCGAAAGGCTGCGTCAGAATCAGAAGGTGAGAGGAGCAATCACTCTGTGGCAGCCACCGTGCATGACGGCGGCGACCGCCACTATGTACCAGCCGGAGCCATCTATCGTAACGCTCGCCTATTTCATCGGAGCTACCAGGAGATGGAGAAAATATTCAAAGTATACGTATACCCAGACGGTGACCTCCCAATCGCTCATGATGGCCCGTGCAAGGACATATACTCAATTGAAGGAAGGTTCCTCCATGAAATGGAACATGGTCCAGGGAGGTTTAGGACCAACGACCCCAATGCCGCTCACGTTTACTTCTTGCCATTCAGTGTGACTTGGATGGTGAAGTACCTCTATACTCCACTCTCATACAACCTAACTCCTTTAAAGCACTTTGTCTCTGACTATGTCAGACTCATATCCATGAGGCACCCCTTCTGGAATACAACTCGTGGCGCCGACCACTTTATGCTTTCATGTCATGATTGGGCTCCTCATGCATCACAGGGAAATCCCTTCCTCTACAACACCTCAATCCGTGTCATGTGCAACGCCAACACCTCAGAGGGCTTCAACCCTCGAAAGGACGTCTCCCTTCCAGAAATCCACCTTTACGGAGGCGATGTCTCCCCCAAACTTCTCTCCCCCCCATCCAACAGCACCCCACGCCGCTACCTCGCCTTCTTCTCCGGCGGTCTGCACGGTCCAATCCGACCCACCCTCCTCCGCCACTGGAAGAACCACGACGGCGACATTCGCGTCTACGAATACCTCCCCAAAGACCTGGACTACTACTCCTTCATGCTCGACTCCAAGTTCTGCCTTTGTCCCAGTGGCCACGAAGTGGCCAGTCCCAGAATCGTGGAAGCAATTTATGCCGAATGCGTTCCCGTGATCCTTTCCAAGTATTACGTGTTGCCCTTCAGTGATGTGCTGCAATGGGAGGCGTTTTCGGTGCAGGTGGATGTTTCAGATATTCCGAGGTTGAAAGAGATTCTGAGTGCGATTTCCGAGGATGAATATTGGAAGCTCAAGGAGGGAGTGAAGGCTGTGAGGAAGCATTTTACACTGAATCGGCCTGCCAAGAGATTCGATGTATTTCACATGATCTTGCACTCTATATGGTTAAGGAGATTAAACATACAACTCAGATAG 1440 0.509 MDIPRKYLFSPILALILLSFIVVVVLRPVQLLKFTTIAGSKRGHSVPLDRLRMKLSGENQLHAVVSSIDLRRNKFSDRTAARKVGKLEQTLAAARASMRKAASESEGERSNHSVAATVHDGGDRHYVPAGAIYRNARLFHRSYQEMEKIFKVYVYPDGDLPIAHDGPCKDIYSIEGRFLHEMEHGPGRFRTNDPNAAHVYFLPFSVTWMVKYLYTPLSYNLTPLKHFVSDYVRLISMRHPFWNTTRGADHFMLSCHDWAPHASQGNPFLYNTSIRVMCNANTSEGFNPRKDVSLPEIHLYGGDVSPKLLSPPSNSTPRRYLAFFSGGLHGPIRPTLLRHWKNHDGDIRVYEYLPKDLDYYSFMLDSKFCLCPSGHEVASPRIVEAIYAECVPVILSKYYVLPFSDVLQWEAFSVQVDVSDIPRLKEILSAISEDEYWKLKEGVKAVRKHFTLNRPAKRFDVFHMILHSIWLRRLNIQLR 479
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00760 479 Coils Coil 84 104 - -
Viun8g00760 479 Pfam Exostosin family 148 430 IPR040911 -
Viun8g00760 479 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 178 459 - -
Viun8g00760 479 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 80 469 IPR004263 GO:0006486|GO:0016757
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00760 Viun-Chr8 6531627 6537037 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00760 - - gmx:100794890 834.713
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00760 8 6531627 6537037 Viun8g00760 8 6531627 6537037 ECH