Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00716 ATGGAGCCGGAAGTTAGCATCGAAGGATCGGCGATGATTCAGGTGGCAGTTGTTCCGGTAGGAGCGGTGCCGTCGAACGTGCTGCGGGACTACTACTGCATGCTGCTCCCGCTGCACACGATCCCGCTCTCCGCCATCAGCTCCTTCTACACCGAGCACCAGAAGTCCCCCTTCGCCGTCCAGCCCTGGGACTCCGGCTCCCTCCGCTTCAAGTTTGTCCTCGGCGGCGCGCCGCCCAGCCCCTGGGAGGACTTTCAGTCGAGCCGCAAAACTCTCGGCGTCGTCGGCATCGTCCACTGTCCTTCCTCCCCCGATCTCGATGCTGCCGTCGACCTTTTCACCAATGTCTGCAAGTCCTTCCCCTCTTCCCTCGTTGAGCGCTGTTTCGCCTTCTGCCCTAACGATTCGCAGCTTGAAGAAGGAAGTAAGAAAGGGGGAAATTTGAGGTTGTTTCCTCCTGCAGATCGTCCTACATTGGAGTTCCACTTGAACACTATGATGCAAGAGATTGCTGCGTCACTGCTTATGGAGTTTGAGAAATGGGTGCTTCAGGCAGAATCTTCCGGAACCATTCTCAAGACGCCTTTAGATTCTCAAGCTAGTCTCAGCTCAGAGGAGGTTATCAAGGCCAAAAAGAGAAGGCTAGGGCGTGCCCAGAAGACCATTGGTGATTACTGTTTGCTGGCAGGGTCCCCTGTGGACGCCAATGCCCATTATTCTACTGCATTGGAACTTTCCAGGTTAACTGGTGATTACTTCTGGTATGCTGGAGCATTGGAGGGTAGTGTCTGTGCCTTGCTGATTGACCGAATGGGCCAAAAAGATTCAGCACTGAAAGAAGAAGTTAGATATCGTTATAACAGTGTGATAGTGAATTACAAGAAGTCACAAGATAATGCTCAGAGAGTTTCTCCCCTTACTTTTGAACTTGAAGCTACTTTGAAATTAGCAAGGTTTCTTTGCAGGAGAGAGCTGGCCAAGGAGGTGGTGGAGTTGTTGACCACAGCTGCAGATGGTGCTAAATCTTTAATTGACGCAAGTGATAGGCTCATATTGTATATTGAAATAGCTCGTCTGTATGGAAGTCTGGGATACCATAGAAAAGCTGCATTTTTCTCAAGGCAGGTTGCACAGTTATATCTGCAGCAAGAAAATAGATTGGCTGCAATTAGTGCTATGCAAGTTTTGGCAATGACGACCAAAGCTTATCATGTTCAAAGTAGATCATCAATCTCTGATCATTCTTTGCACAGTAATGGAATTGTATCAAATCATGCTGATAGTGGGAAAACAAACCACCAATCAGCAGTCTCACTATTTGAGTCTCAGTGGAGTACCCTCCAGATGGTTGTATTAAGAGAAATTCTACTCTCTGCTGTGCGTGCTGGTGATCCTCTCACTGCGTGGAGTGCAGCAGCCCGACTCCTTAGATCCTACTATCCTCTAATAACACCTGCTGGGCAAAATGGCCTTGCTAATGCACTTTCAAATTCAGCTGACAGGCTGCCACCAGGAACTCGCTGTGCTGATCCTGCTTTACCCTTTGTGAGGCTGCATTCATTTCCTCTCCACCCAACACAAGTAGACATAATAAAGCGCAGTTCTGCCAGAGAAGATTGGTGGGCTGGTGCTGCTCCTTCTGGGCCTTTCATTTATACACCATTCAGTAAAGGAGAGACTAACAATGTCAAGAAGCATGAGCTTATTTGGATTGTTGGAGAACCTGTTGAGGTCTTGGTGGAATTGGCAAACCCATGTGGCTTTGATTTAAGGGTTGATAGCATCTATCTATCCGTGCATTCTGGAAATTTTGATGCTTTCCCCGTAAGTGTAAGCCTTCTACCAAATTCTTCAAAAGTGATCACCTTATCTGGTATTCCAACATCAGTGGGACCAGTTTCAATTCCTGGGTGCATTGTTCACTGTTTTGGTGTTATTACTGAACATCTGTTTAAAGAGGTTGACAATCTGCTTCTTGGGGCCTCACAAGGGCTGGTTCTTTCTGACCCTTTTCGATGCTGTGGATCTCCAAAGTTGAAAAATGTGTCTGTGCCTAATATTTCTGTAGTACCACCACTTCCATTATTGGTATCACATGTTGTTGGAGGTGATGGAGCCATCATTTTATATGAAGGAGAAATTCGGGATGTGTGGATTCGCCTGGCTAATGCAGGTACTGTTCCAATTGAGCAGGCCCATATTTCACTGTCTGGAAAAAATCAAGATTCTGTAATTTCATATTCTTCCGAAACTTTGAAATCTTGCCTCCCTCTGAGACCTGGAGCAGAAGTTACATTCCCTGTGACCTTGAGAGCCTGGCAGGTTGGCTTGCTGGATGCAGATGCTGGTGCAGGGAAGACTGTCTCAGGGAACAATTTGAGGCATTCCAAAGATGGAAGCAGCCCATCGCTGTTGATCCACTATGCTGGTCCGACGAAAACCTCTGAAGAAACTACCACGAATGGATCTACTGTGCCCCCTGGCAGAAGGCTTGTTGTTCCTCTGCAGATTTGTGTTTTGCAGGGCTTGTCCTTTGTGAAGGCTCAGCTTCTTTCAATGGAATTTCCTGCTCATGTTGGTGAAAGTCTTCCGAAGTTGGATGATGTAAATAATAAGTCTACTGATGAAAATGTTAACTCAGAGACAAAAATGGACAGATTGGTGAAAATAGATCCTTTCAGAGGAAGTTGGGGGCTGCGATTCCTTGAACTTGAGTTATCTAATCCAACTGATGTTGTGTTTGAAATCAATGTCTCTGTCAAACTGGAGAACTCAAGCAGTGAGAACAACCATCTTGCTGATCAGGGTGCAACTGAATTTGTCTATCCTAAAACAAGAATTGATAGAGATTGCTCAGCGAGGGTTCTAGTGCCTCTTGAGCATTTTAAATTACCCGTTCTTGACGATTCCTTTTTTATGAAGGATACCCATTTAGATGGGAATGGAGGAAGAAATGCATCCTTCTCAGAGAAGAACACCAAAGCTGAACTAAATGCTTGCATCAAGAACCTTATATCTAGGATTAAGGTTCGATGGCATTCAGGACGGAATAGCTCTGGGGAGTTAAATATCAAAGAAGCTATCCAGGCTGCTCTCCAAACATCAGTCATGGATGTTTTACTTCCAGATCCATTGACGTTTGGCTTCAGGCTTGTTAGAGATGGTTCTGAATCAAGAACAGCTGATCCTGATAAAGAATCTGAATCTGCTGCTTCCAAAGGTTCCGTGATTGCTCATGAAATGACAGCAATGGAAGTTGTGGTTCGTAATAATACTAAAGATATGCTCAAATTGAGTCTTAATATTACATGCAGAGATGTAGCCGGTGAAAATTGTGTAGATGGTACCAAAGCGACTGTTCTATGGACGGGTGTTCTGAGTGACATTGCCATGGAAATTCCCCCACTTCAACAAATCAGACACTCGTTCTGCCTTCATTTTCTTGTCCCTGGAGAGTATACACTACTTGCTGCAGCAGTGATTGAGGATGCAAATGACATTCTTCGTGCTCGTGCCAAGACCACCTCGGCTTCTGAGCCAATTTTCTGTCGTGGACCACCCTATCACGTTCGTGTCCTTGGCACTGCATGA 3591 0.4586 MEPEVSIEGSAMIQVAVVPVGAVPSNVLRDYYCMLLPLHTIPLSAISSFYTEHQKSPFAVQPWDSGSLRFKFVLGGAPPSPWEDFQSSRKTLGVVGIVHCPSSPDLDAAVDLFTNVCKSFPSSLVERCFAFCPNDSQLEEGSKKGGNLRLFPPADRPTLEFHLNTMMQEIAASLLMEFEKWVLQAESSGTILKTPLDSQASLSSEEVIKAKKRRLGRAQKTIGDYCLLAGSPVDANAHYSTALELSRLTGDYFWYAGALEGSVCALLIDRMGQKDSALKEEVRYRYNSVIVNYKKSQDNAQRVSPLTFELEATLKLARFLCRRELAKEVVELLTTAADGAKSLIDASDRLILYIEIARLYGSLGYHRKAAFFSRQVAQLYLQQENRLAAISAMQVLAMTTKAYHVQSRSSISDHSLHSNGIVSNHADSGKTNHQSAVSLFESQWSTLQMVVLREILLSAVRAGDPLTAWSAAARLLRSYYPLITPAGQNGLANALSNSADRLPPGTRCADPALPFVRLHSFPLHPTQVDIIKRSSAREDWWAGAAPSGPFIYTPFSKGETNNVKKHELIWIVGEPVEVLVELANPCGFDLRVDSIYLSVHSGNFDAFPVSVSLLPNSSKVITLSGIPTSVGPVSIPGCIVHCFGVITEHLFKEVDNLLLGASQGLVLSDPFRCCGSPKLKNVSVPNISVVPPLPLLVSHVVGGDGAIILYEGEIRDVWIRLANAGTVPIEQAHISLSGKNQDSVISYSSETLKSCLPLRPGAEVTFPVTLRAWQVGLLDADAGAGKTVSGNNLRHSKDGSSPSLLIHYAGPTKTSEETTTNGSTVPPGRRLVVPLQICVLQGLSFVKAQLLSMEFPAHVGESLPKLDDVNNKSTDENVNSETKMDRLVKIDPFRGSWGLRFLELELSNPTDVVFEINVSVKLENSSSENNHLADQGATEFVYPKTRIDRDCSARVLVPLEHFKLPVLDDSFFMKDTHLDGNGGRNASFSEKNTKAELNACIKNLISRIKVRWHSGRNSSGELNIKEAIQAALQTSVMDVLLPDPLTFGFRLVRDGSESRTADPDKESESAASKGSVIAHEMTAMEVVVRNNTKDMLKLSLNITCRDVAGENCVDGTKATVLWTGVLSDIAMEIPPLQQIRHSFCLHFLVPGEYTLLAAAVIEDANDILRARAKTTSASEPIFCRGPPYHVRVLGTA 1196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00716 1196 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 327 742 IPR013935 -
Viun8g00716 1196 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 201 278 IPR013935 -
Viun8g00716 1196 Pfam Transport protein Trs120 or TRAPPC9, TRAPP II complex subunit 9 190 IPR013935 -
Viun8g00716 1196 PANTHER TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 9 1 1190 IPR013935 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00716 K20306 - gmx:100784850 2210.26