Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00711 ATGGCTTCTTCTGTTCTCTCCGCAGCTTCACCTTCTCTCGCTGTCTCTTCTTCTCTCTCCTCGCGCCAAACCCACAAGGGGAAGCCCAAGACTGGAGGCAACGCTTTGAGATTTAACAATGGAATCAAATCCTTCCCAAATGCAAGGTCTAGTGGTCGGGTCTCTATGGCTGTTGCAGTTAATGTTTCTCGGTTTGAGGGCATACCTATGGCTCCTCCTGACCCAATTCTTGGAGTTTCTGAGGCATTTAAAGCGGACACAAGTGATGCAAAGCTCAATCTTGGAGTAGGGGCGTACAGAACAGAAGAACTACAGCCATATGTGCTTAATGTTGTTAAGAAGGCAGAGAATCTTATGCTGGAGAGGGGGGATAAGAAAGAGTATCTCCCTATTGAGGGTTTGGCTGCCTTTAACAAGGCAACGGCAGAGTTGTTACTTGGAGCAGACAACCCAGCAATCAAACAGCAAAGAGTTGCCACTGTCCAAGGTCTTTCTGGAACTGGTTCTCTGAGGCTAGGTGCAGCTCTGATAGAAAGATATTTTTCTGGGGCTAAAGTTTTGATATCAGCTCCTACCTGGGGTAATCACAAGAATATTTTCAATGATGCTAGAGTACCGTGGTCTGAGTATCGATATTATGAACCCAAGACTGTTGGCTTGGATTTTGAGGGCATGATTGAAGATATAAAGTCCGCTCCTGAAGGATCTTTTGTGGTACTACATGGATGTGCTCATAACCCAACTGGTATTGATCCAACACCTGAACAATGGGAAAAAATAGCTGATGTAATTCAAGAAAAGAACCACATTCCCTTTTTTGATGTTGCTTACCAGGGCTTTGCCAGTGGAAGCCTTGATGAAGATGCAGCTTCTGTGAGACTGTTTGTTGCTCGTGGTATGGAGGTTCTTGTGGCTCAGTCATACAGTAAAAATCTCGGTCTCTATGCTGAAAGGATTGGAGCAATCAACGTGATTTCATCATCCCCAGAAGCTGCAACTAGAGTAAAGAGCCAGTTGAAAAGGCTTGCCCGACCTATGTACTCTAATCCACCTGTACATGGGGCTCGAATTGTTGCCGATGTTGTTGGAAACCCAGTTCTCTTTAATGAATGGAAAGCAGAAATGGAAATGATGGCAGGAAGGATCAAGAATGTTAGACAACAGCTATACAATAGCATTACTTCAAAAGACAACAGTGGAAAAGATTGGTCATTTATACTTAAGCAGATAGGCATGTTCTCATTCACCGGCTTGAACAAGGAACAGAGTGACAACATGACAAATAAGTGGCATGTATACATGACAAAGGATGGAAGGATTTCCCTGGCAGGATTGTCGTTGGCGAAATGTGAATACCTTGCAGATGCTATCATAGACTCGTATCATAATGTCAGCTGA 1398 0.4406 MASSVLSAASPSLAVSSSLSSRQTHKGKPKTGGNALRFNNGIKSFPNARSSGRVSMAVAVNVSRFEGIPMAPPDPILGVSEAFKADTSDAKLNLGVGAYRTEELQPYVLNVVKKAENLMLERGDKKEYLPIEGLAAFNKATAELLLGADNPAIKQQRVATVQGLSGTGSLRLGAALIERYFSGAKVLISAPTWGNHKNIFNDARVPWSEYRYYEPKTVGLDFEGMIEDIKSAPEGSFVVLHGCAHNPTGIDPTPEQWEKIADVIQEKNHIPFFDVAYQGFASGSLDEDAASVRLFVARGMEVLVAQSYSKNLGLYAERIGAINVISSSPEAATRVKSQLKRLARPMYSNPPVHGARIVADVVGNPVLFNEWKAEMEMMAGRIKNVRQQLYNSITSKDNSGKDWSFILKQIGMFSFTGLNKEQSDNMTNKWHVYMTKDGRISLAGLSLAKCEYLADAIIDSYHNVS 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00711 465 FunFam Aspartate aminotransferase 351 457 - -
Viun8g00711 465 ProSitePatterns Aminotransferases class-I pyridoxal-phosphate attachment site. 307 320 IPR004838 GO:0003824|GO:0009058|GO:0030170
Viun8g00711 465 Pfam Aminotransferase class I and II 91 457 IPR004839 GO:0009058|GO:0030170
Viun8g00711 465 PANTHER ASPARTATE AMINOTRANSFERASE 58 463 IPR000796 GO:0006520|GO:0008483
Viun8g00711 465 MobiDBLite consensus disorder prediction 16 39 - -
Viun8g00711 465 Gene3D - 123 364 IPR015421 GO:0003824
Viun8g00711 465 FunFam Aspartate aminotransferase 123 364 - -
Viun8g00711 465 SUPERFAMILY PLP-dependent transferases 63 459 IPR015424 -
Viun8g00711 465 Gene3D Aspartate Aminotransferase, domain 1 68 457 IPR015422 GO:0003824
Viun8g00711 465 PRINTS Aspartate aminotransferase signature 238 257 IPR000796 GO:0006520|GO:0008483
Viun8g00711 465 PRINTS Aspartate aminotransferase signature 406 424 IPR000796 GO:0006520|GO:0008483
Viun8g00711 465 PRINTS Aspartate aminotransferase signature 337 362 IPR000796 GO:0006520|GO:0008483
Viun8g00711 465 PRINTS Aspartate aminotransferase signature 269 281 IPR000796 GO:0006520|GO:0008483
Viun8g00711 465 CDD AAT_like 92 457 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00711 Viun-Chr8 5828557 5833537 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00711 K00811 - gmx:547792 839.336