Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00658 ATGGAGAAACAGCACCACCAACAACGTAAACCCAACAACATCAACGCTTCCGACACCGACCCTTTCCTCTTAAACTACACACCTTCGGATCTCCGAACCGCTTCGGAGTTTCTCGCCACGTGGCTCCCCTTCCTCTCCCAAGATCTCTGCGCGCGCTGCACTCAATCTCTCTCCGATCGTATTCAATCCATCGACCCAGGTGAAGTGCCCCAAAACGACAGCCCCAATGACCAAAACGACGCTGAAGATAACTGCGACACGCACTCGCTGGGGAGTTGGAAAGATGGGGCGGAGGTGAATTCCTGTGTGGAGACTCCTAGCCAGAGAGTTTGTTGGGCTGACATGGCCCAAGAGGATGATGAGTTTGGCGAAGAAGAAAACAACAACAATGTGGTTAATGTTGTTATGGGTAATTCGAATGATGCTTCTGGTGTGGGTGCGGCTGTGGCTGAGAAGCCTACTTTGCCTCCGGAGCGGAGGGAGTACCTTAGGTTCACGAGTGTGAGGCGCAAGAAAGACTTTGCCTGCTTTGAGAGGGTTAATGGGAAGCTTGTCAACATTCTTGGAGGGCTTGAACTCCACACTGGGATTTTCAGTGCTGCTGAACAGAGAAGAATTGTCAATTATGTTGCTTCATTACAGGACATGGGGAAAAGAGGAGAATTGAAAGAGCGAACATTTTCTGCTCCCCAAAAGTGGATGAGGGGCAAGGGACGACAAACTATCCAATTTGGGTGCTGTTACAATTATGCAGTGGATAGAGATGGTAACCCACCTGGTATTCTTCCACATTCAATGGTTGATCCTTTACCTGATCTTTTCAAAGTCATCATCCGACGACTGATCAAGTGGCATGTACTACCTCCTACTTGTGTGCCAGACAGTTGCATTGTTAATATATATGAAGAAGGGGACTGTATACCTCCACACATAGATAACCATGACTTTGTTCGACCATTTTGCACTGTCTCATTTCTTAGCGAGTGCAATATAGTTTTTGGAGCAAACTTAAAGATTGTAGGCCCCGGTGAATTTGATGGTTCGATTGCTATTCCATTACCTGTGGGATCTGTACTTGTCTTGAATGGAAATGGAGCTGATGTAGCTAAGCACTGTGTGCCAGCAGTTCCTGCAAAAAGGATATCAATCACATTTAGAAGAATGGACGAGTCAAAGAGGCCTTTTGGGTATGTTCCTGAACCTGATCTTCAGGGAATCCAACCATTGACCTATAAAGCTGAGGACGAAAAGAAATCAGGTGGACACAGATCTAGTCATCATGTGAGAAGACAAAGAGACCGGAGAGGTGGCAGGAATGATGCAATGGGATTTGCATCTAGAAATGATAGGTTCTCAGAGCGTGATTCGAATCATAATACACCCAGATCTGGAAATAGGTGGAGTAGAAATCTTGATGGTTGA 1422 0.4641 MEKQHHQQRKPNNINASDTDPFLLNYTPSDLRTASEFLATWLPFLSQDLCARCTQSLSDRIQSIDPGEVPQNDSPNDQNDAEDNCDTHSLGSWKDGAEVNSCVETPSQRVCWADMAQEDDEFGEEENNNNVVNVVMGNSNDASGVGAAVAEKPTLPPERREYLRFTSVRRKKDFACFERVNGKLVNILGGLELHTGIFSAAEQRRIVNYVASLQDMGKRGELKERTFSAPQKWMRGKGRQTIQFGCCYNYAVDRDGNPPGILPHSMVDPLPDLFKVIIRRLIKWHVLPPTCVPDSCIVNIYEEGDCIPPHIDNHDFVRPFCTVSFLSECNIVFGANLKIVGPGEFDGSIAIPLPVGSVLVLNGNGADVAKHCVPAVPAKRISITFRRMDESKRPFGYVPEPDLQGIQPLTYKAEDEKKSGGHRSSHHVRRQRDRRGGRNDAMGFASRNDRFSERDSNHNTPRSGNRWSRNLDG 473
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00658 473 MobiDBLite consensus disorder prediction 61 92 - -
Viun8g00658 473 MobiDBLite consensus disorder prediction 414 473 - -
Viun8g00658 473 MobiDBLite consensus disorder prediction 1 22 - -
Viun8g00658 473 PANTHER HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY PROTEIN-RELATED 29 421 IPR044842 GO:0003729|GO:0006402|GO:0032451
Viun8g00658 473 Gene3D - 174 393 IPR037151 -
Viun8g00658 473 SUPERFAMILY Clavaminate synthase-like 188 388 - -
Viun8g00658 473 Pfam 2OG-Fe(II) oxygenase superfamily 191 386 IPR027450 -
Viun8g00658 473 ProSiteProfiles Fe(2+) 2-oxoglutarate dioxygenase domain profile. 292 389 IPR005123 -
Viun8g00658 473 MobiDBLite consensus disorder prediction 61 78 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00658 Viun-Chr8 5141120 5145189 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00658 K10767 - gmx:100797674 754.592