Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00652 ATGTTGTTTTCTCCAAATTTGTGGCCAATGGAACACGGTTTGAAAAGAAAGTCTCCAGAAAATGGAGACTATTCACACTTGAACGGTTTTTCTCTGGATGACCTTAACGAAGATCTCTTAGAGAGGGTCCTTTCATGGCTACCAACTTCCTCCTTCTTCCGCCTTACTTCTGTCTGCAAGAGATGGAAATCAGCTGCTGCTTCTGTGAGTTTCAAGCTTGCCTGCTCACACATTCCCTCGAGAGATCCATGGTTTCTGATGGTTTCTCCTAGCCTCAACCACTCCATTGTCTTTGACACTGCTGAAAACAGTTGGAAAAAACTCAATCACTTGCGTCTTCCTCTCGAAGACTCTAACATAAACTGCATGCCTGTTGCAGCATCTGGTGGCCTGGTTTGCTACCGCAAACTCTCAGGAAACTTTGTTGTATGCAATCCAGTCACAGGATCCTGCACTGAACTCCCTCCATTGCATTTCCCCTCAGAAAACCAGCCTCTCAATGCCGTTGTGATGAGTACAACTCTCAGAGATCAAATCTCCTACAAGATTGTGTTAGTCTTCGGTGAACTCCCTAATCTTTTGTTCAAAGTCTATGACTCAACCTCTTGCTGTTGGGAAGATGACACTGCACTGAGGAGGGAGGTTGATGACAGTTCCATTGATTGTGATTCAACCGATGATGGTGATGATGACAATGTTGTGTACTTCCTTAGTAAAGCTGGAACAGTGGTGGCAAGTAGCATGCAGAGGAGCCCTTCTAAGCAATATTCCTCGGTCATTACCACAAAAAATGGTCATGAAATGCTGTATTTCCTCAGCTCCTCAGGGACAGTGGTAGCTTGCAATTTGACATCCAAGTGTTTTTTTGAGTATCCGAGGTTGTTGCCTGTTTTCAGTGAGTACTCCATTGACATTGTGGAGTGTGGTGGTGAGATGCTGGTTGTTCTGTTATCAGAATTCTTGGAGAGCACGAGTCTTAGGGTGTGGAAATACGATGACACCAATAGATGCTGGCAACAGATTGCTGCAATGGCTGCAGCAATGTCTCAAGAATGGTATGGAAAGAAGGCAGATATTAACTGTGTTGGTGCTGGCCATCAGATACTTATATGCTTGAACTCTCCTGAGCTATGCACTTACGTTCTCTGTGATTTGGTGACCAACACATGGACAGAGTTGCCCAAATGTTGCATGAATGGAGAAGTCATGGAGTTCATGTCTGCATTTTCGTTTGAGCCGAGGATAGAGGCTTGTGTATGA 1260 0.4468 MLFSPNLWPMEHGLKRKSPENGDYSHLNGFSLDDLNEDLLERVLSWLPTSSFFRLTSVCKRWKSAAASVSFKLACSHIPSRDPWFLMVSPSLNHSIVFDTAENSWKKLNHLRLPLEDSNINCMPVAASGGLVCYRKLSGNFVVCNPVTGSCTELPPLHFPSENQPLNAVVMSTTLRDQISYKIVLVFGELPNLLFKVYDSTSCCWEDDTALRREVDDSSIDCDSTDDGDDDNVVYFLSKAGTVVASSMQRSPSKQYSSVITTKNGHEMLYFLSSSGTVVACNLTSKCFFEYPRLLPVFSEYSIDIVECGGEMLVVLLSEFLESTSLRVWKYDDTNRCWQQIAAMAAAMSQEWYGKKADINCVGAGHQILICLNSPELCTYVLCDLVTNTWTELPKCCMNGEVMEFMSAFSFEPRIEACV 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00652 419 CDD F-box_AtFBW1-like 33 71 - -
Viun8g00652 419 SUPERFAMILY Galactose oxidase, central domain 95 395 IPR011043 -
Viun8g00652 419 SUPERFAMILY F-box domain 29 88 IPR036047 GO:0005515
Viun8g00652 419 Gene3D - 86 400 IPR015915 GO:0005515
Viun8g00652 419 ProSiteProfiles F-box domain profile. 29 74 IPR001810 GO:0005515
Viun8g00652 419 Pfam F-box domain 32 72 IPR001810 GO:0005515
Viun8g00652 419 FunFam F-box only protein 13 27 72 - -
Viun8g00652 419 Gene3D - 25 71 - -
Viun8g00652 419 PANTHER BNACNNG10540D PROTEIN 262 418 - -
Viun8g00652 419 SMART fbox_2 35 75 IPR001810 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00652 Viun-Chr8 5113586 5115688 Dispersed/Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00652 - - vun:114195471 837.41