Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Viun8g00617 ATGCAGACATTCAAAGCTCTGCTACCGCAAACAAGGACCTCACTTCGCACTCTCTATTCTTATCGTCGAGCTTTCTCTGCTCAACCAAATTACGCAGAGCACGACGATGACGATTCTCAGGAGCAGATTCTAGTCGAAGGAAGAGCAAAATCACGAGCAGCTATTCTCAACAGGCCTTCTTCGCTGAACTCGCTCAATGCGTCCATGGTTGGTCGATTGAAGAGGTTGTATGATTCGTGGGAAGAGAACTCTGACATTGGATTTGTTTTGATGAAGGGTAGTGGCAGAGCTTTCTGTTCTGGTGCAGATGTTCTTAGGTTGTATCACACACTCAATGAAGGAAATGCCGACGAAGCTGAACAGTTTTTCAAAACATTATATTCATTTGTATATCTTCAAGGGACTTATCTTAAACCACATGTGGCAATTTTGGATGGAATAACAATGGGATGTGGATCTGGAATTTCTCTACCAGGGATGTTTCGTGTTGTAACAGATAAAACTTTTTTTTCTCACCCAGAGGCTCAAATAGGTTTCCATCCAGATGCAGGAGCTTCTTATATTTTGTCTCGGCTACCTGGCTACTTGGGGGAATACTTGGCCCTTACAGGAGATAAGCTTAATGGTGTTGAAATGATTGCCTGCGGCCTTGCTACTCATTATTCATTAAATGCAAGGCTTGCTTTGCTTGAAGAACACCTCGGTAAACTAATCACAGATGAACCTTCTGTTGTTGAGGCATCCCTTGCACAGTATGGTGATATTGTTTATCCAGATAAGAGCAGTGTCCTTCACAGGATTGATACTATTGACAGATGTTTTAGTCACGACACTGTGGAGGAAATTATTGAAGCTCTGGAGAAAGAGGCTGTCGACTCTTATGACAATTGGTGCTCGACTACTCTTAGGAGAATAAGGGAAGCCTCCCCATTGAGTTTAAAAGTTATCTTACGATCTATACGTGAAGGTAGATTTGAAACTCTCGATAAATGTCTCGTACGTGAGTACCGTATGTCCCTACGTGGAATTTCTAAGAATGTTTCCTCCGATTTCTTTGAGGGTGTTCGAGCAAGAATGGTTGATAAAGATTTTGCACCAAAGTGGGATCCACCTAGTTTAAAAGAAATATCAGAGGACATGGTTGACTACTATTTCTCTCCATTAGAGTCTGAACTAGTGCTGCCGACGGCTTTGAGAGAACCTTACATGTGA 1212 0.4233 MQTFKALLPQTRTSLRTLYSYRRAFSAQPNYAEHDDDDSQEQILVEGRAKSRAAILNRPSSLNSLNASMVGRLKRLYDSWEENSDIGFVLMKGSGRAFCSGADVLRLYHTLNEGNADEAEQFFKTLYSFVYLQGTYLKPHVAILDGITMGCGSGISLPGMFRVVTDKTFFSHPEAQIGFHPDAGASYILSRLPGYLGEYLALTGDKLNGVEMIACGLATHYSLNARLALLEEHLGKLITDEPSVVEASLAQYGDIVYPDKSSVLHRIDTIDRCFSHDTVEEIIEALEKEAVDSYDNWCSTTLRRIREASPLSLKVILRSIREGRFETLDKCLVREYRMSLRGISKNVSSDFFEGVRARMVDKDFAPKWDPPSLKEISEDMVDYYFSPLESELVLPTALREPYM 403
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Viun8g00617 403 PANTHER 3-HYDROXYISOBUTYRYL-COA HYDROLASE-RELATED 37 396 IPR032259 GO:0003860
Viun8g00617 403 SUPERFAMILY ClpP/crotonase 48 371 IPR029045 -
Viun8g00617 403 CDD crotonase-like 56 220 - -
Viun8g00617 403 FunFam Probable 3-hydroxyisobutyryl-CoA hydrolase 2 37 398 - -
Viun8g00617 403 Gene3D - 37 396 - -
Viun8g00617 403 Pfam Enoyl-CoA hydratase/isomerase 53 385 IPR045004 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Viun8g00617 Viun-Chr8 4710752 4720757 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Viun8g00617 1 403 Acyl Lipid Metabolism Gene Families AT4G31810 69.586 0.0 596
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Viun8g00617 K05605 - gmx:100808892 735.332
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Viun8g00617 8 4710752 4720757 Viun8g00617 8 4710752 4720757 ECH